Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DV114_RS07730 | Genome accession | NZ_CP031251 |
| Coordinates | 1613826..1614293 (+) | Length | 155 a.a. |
| NCBI ID | WP_114926326.1 | Uniprot ID | - |
| Organism | Neisseria subflava strain M18660 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1608826..1619293
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV114_RS07715 | - | 1609283..1609723 (+) | 441 | WP_107697175.1 | TIGR01244 family sulfur transferase | - |
| DV114_RS07720 | - | 1610159..1610455 (+) | 297 | WP_003680870.1 | helix-turn-helix transcriptional regulator | - |
| DV114_RS07725 | glnD | 1610475..1613033 (+) | 2559 | WP_114926325.1 | [protein-PII] uridylyltransferase | - |
| DV114_RS07730 | pilE | 1613826..1614293 (+) | 468 | WP_114926326.1 | pilin | Machinery gene |
| DV114_RS07735 | - | 1614376..1614834 (+) | 459 | WP_114926327.1 | pilin | - |
| DV114_RS07740 | - | 1615263..1616789 (-) | 1527 | WP_114926328.1 | DHA2 family efflux MFS transporter permease subunit | - |
| DV114_RS07745 | - | 1616891..1618081 (-) | 1191 | WP_107697170.1 | efflux RND transporter periplasmic adaptor subunit | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 16039.36 Da Isoelectric Point: 7.7652
>NTDB_id=304992 DV114_RS07730 WP_114926326.1 1613826..1614293(+) (pilE) [Neisseria subflava strain M18660]
MKAIQKGFTLIELMIVIAIIGILAVIALPAYQDYTARAQVSEAFALAEGQKAAVVEYYADKGAYPSDNAAAGVAAADKIT
GKYVEKVNIGGTGVEDGVITATMKTSNVNAALSGKTLTLTPKASVDATSSANNPGSFTWECGGTIDKKYRPAACR
MKAIQKGFTLIELMIVIAIIGILAVIALPAYQDYTARAQVSEAFALAEGQKAAVVEYYADKGAYPSDNAAAGVAAADKIT
GKYVEKVNIGGTGVEDGVITATMKTSNVNAALSGKTLTLTPKASVDATSSANNPGSFTWECGGTIDKKYRPAACR
Nucleotide
Download Length: 468 bp
>NTDB_id=304992 DV114_RS07730 WP_114926326.1 1613826..1614293(+) (pilE) [Neisseria subflava strain M18660]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAATTGATGATCGTCATCGCGATTATCGGCATCTTGGCAGTTATCGC
CCTGCCTGCATACCAAGACTACACTGCACGCGCCCAAGTTTCTGAAGCATTTGCTTTAGCTGAAGGCCAAAAAGCTGCTG
TGGTTGAATACTATGCTGACAAAGGTGCTTACCCTAGCGACAATGCGGCTGCAGGCGTTGCGGCTGCTGACAAAATTACT
GGCAAGTATGTTGAAAAAGTAAATATCGGTGGAACTGGTGTAGAAGATGGTGTAATTACAGCCACCATGAAAACAAGTAA
CGTAAATGCTGCCCTCTCTGGGAAAACATTAACTTTAACACCTAAAGCATCAGTTGATGCAACTTCTTCTGCTAATAATC
CAGGTTCATTTACTTGGGAATGTGGTGGTACTATCGATAAGAAATACCGTCCTGCTGCTTGCCGCTAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAATTGATGATCGTCATCGCGATTATCGGCATCTTGGCAGTTATCGC
CCTGCCTGCATACCAAGACTACACTGCACGCGCCCAAGTTTCTGAAGCATTTGCTTTAGCTGAAGGCCAAAAAGCTGCTG
TGGTTGAATACTATGCTGACAAAGGTGCTTACCCTAGCGACAATGCGGCTGCAGGCGTTGCGGCTGCTGACAAAATTACT
GGCAAGTATGTTGAAAAAGTAAATATCGGTGGAACTGGTGTAGAAGATGGTGTAATTACAGCCACCATGAAAACAAGTAA
CGTAAATGCTGCCCTCTCTGGGAAAACATTAACTTTAACACCTAAAGCATCAGTTGATGCAACTTCTTCTGCTAATAATC
CAGGTTCATTTACTTGGGAATGTGGTGGTACTATCGATAAGAAATACCGTCCTGCTGCTTGCCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
49.711 |
100 |
0.555 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
50 |
100 |
0.555 |
| pilA2 | Legionella pneumophila str. Paris |
48.684 |
98.065 |
0.477 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.684 |
98.065 |
0.477 |
| pilA/pilA1 | Eikenella corrodens VA1 |
42.941 |
100 |
0.471 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
41.618 |
100 |
0.465 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.508 |
100 |
0.445 |
| comP | Acinetobacter baylyi ADP1 |
42.308 |
100 |
0.426 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40 |
100 |
0.413 |
| pilA | Haemophilus influenzae Rd KW20 |
40.278 |
92.903 |
0.374 |
| pilA | Acinetobacter nosocomialis M2 |
48.305 |
76.129 |
0.368 |