Detailed information NTG0301316

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: DPR03_RS01385
• Genome accession: NZ_CP030754
• Coordinates: 288932..291097 (+)
• Length: 721 a.a.
• NCBI ID: WP_071319794.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain H3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 283932..296097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPR03_RS01365	pilM	285976..287034 (+)	1059	WP_004810013.1	pilus assembly protein PilM	Machinery gene
DPR03_RS01370	comN	287034..287675 (+)	642	WP_005223471.1	PilN domain-containing protein	Machinery gene
DPR03_RS01375	comO	287669..288388 (+)	720	WP_171260573.1	type 4a pilus biogenesis protein PilO	Machinery gene
DPR03_RS01380	pilP	288388..288915 (+)	528	WP_004810006.1	pilus assembly protein PilP	Machinery gene
DPR03_RS01385	pilQ	288932..291097 (+)	2166	WP_071319794.1	type IV pilus secretin PilQ family protein	Machinery gene
DPR03_RS01390	aroK	291134..291670 (+)	537	WP_071319795.1	shikimate kinase AroK	-
DPR03_RS01395	aroB	291698..292777 (+)	1080	WP_071319796.1	3-dehydroquinate synthase	-
DPR03_RS01400	-	292791..293633 (+)	843	WP_071319797.1	hypothetical protein	-

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 78331.58 Da
• Isoelectric Point: 5.1414

>NTDB_id=301316 DPR03_RS01385 WP_071319794.1 288932..291097(+) (pilQ) [Acinetobacter schindleri strain H3]
MNKSFKEFIFGDANTMNHVFRQFSMGAVAIAVMQAASAQVSMTNVVPMQLPGQGTEIRVMFNGLPPQPQAYQLESPSRLI
LDFDKAQQNLKQSSIAVATKEASSVDVTSDAQRARLTVNLADAGAFTTRVEGNTFILKINSTNPVIPVQPVVQQNTQGIT
NIGFQRGAKGEGQVVIDLASGNTPVDVQQQGTKVIVRALGSKIPTHLTRRLNVNDFATPVSTVDAVNQNGSGVITIQTSD
SYEYMAYQTDNKLTISLKRPEEKNPLRPKAAQHYTGKKISLDFQDIEVRRVLQLLADFTDINMVAADSVQGNITLRLKEV
PWDQALDIVLKTKNLDKRRNGNVIWIAPVSELIKAEEEEAKALAQSVKLAPIQTEYMQLSYAKAADIEKLITQNKGASSA
GSNTGSTSGDDKESLLSSRGSISIDARTNTLIVNDTQPFIDKIRNMVDLLDVQVKQVMVEARIVRASTEFTKEIGVKWGI
LSQGITNNNNLLVGGSDTTLWDLRDPQESDLGGYTYDIQRPDNLNVDLGVANPAGRIAFGLISLSDFMLDLELSALQADG
YGEVISTPKVLTADKQAAKVSSGTQIPYQSSEGGGANAVSTTEFIDATLSLDVTPSITPDGKVQMLLNITSDTPGNPTPT
GQLTINKNQISTNVLVDNGETVVLGGIFEQETRNGQTKVPFLGDIPYLGHLFRRDLKSDNKRELLIFVTPRIVNDSVSRN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=301316 DPR03_RS01385 WP_071319794.1 288932..291097(+) (pilQ) [Acinetobacter schindleri strain H3]
ATGAATAAAAGTTTTAAAGAATTTATTTTTGGGGATGCTAATACAATGAATCATGTGTTTCGTCAGTTTTCAATGGGGGC
AGTTGCCATTGCTGTTATGCAGGCGGCAAGTGCACAGGTTTCGATGACCAATGTGGTACCAATGCAGCTTCCTGGTCAAG
GTACTGAAATTCGCGTGATGTTTAATGGCTTGCCGCCTCAACCACAAGCTTATCAATTAGAATCACCATCACGTCTGATT
CTGGATTTTGATAAAGCACAGCAGAATTTAAAACAAAGCAGTATTGCTGTTGCAACGAAAGAAGCAAGTTCTGTAGATGT
GACTTCAGATGCCCAGCGTGCACGTTTAACTGTGAATCTGGCTGATGCGGGTGCATTTACCACGCGTGTTGAAGGCAATA
CCTTTATTCTAAAAATCAATTCAACCAATCCAGTTATCCCTGTACAGCCAGTCGTACAACAAAATACTCAAGGCATTACC
AATATTGGGTTCCAGCGCGGGGCGAAAGGTGAAGGTCAGGTCGTGATCGATCTGGCGAGTGGTAATACACCGGTTGATGT
ACAACAGCAAGGCACTAAAGTTATTGTACGGGCATTAGGCTCCAAGATTCCTACTCATTTAACGCGTCGTCTGAATGTGA
ATGATTTTGCTACACCTGTTTCGACAGTAGATGCAGTCAACCAGAATGGCTCTGGAGTGATTACCATTCAAACTTCAGAT
AGCTATGAATACATGGCTTATCAAACCGATAATAAACTGACAATTAGTTTAAAACGCCCAGAAGAGAAAAATCCATTACG
TCCAAAAGCTGCTCAGCATTATACTGGTAAGAAAATTTCTTTAGATTTTCAGGATATTGAAGTTCGCCGAGTATTACAGC
TACTAGCAGATTTCACTGACATTAATATGGTTGCAGCAGACAGCGTACAAGGCAATATTACTTTACGTCTTAAGGAAGTG
CCTTGGGATCAGGCTTTAGATATTGTTTTAAAGACTAAGAATTTGGATAAGCGTCGTAATGGTAATGTAATCTGGATAGC
GCCTGTATCTGAGCTCATTAAAGCTGAAGAAGAAGAAGCCAAAGCACTTGCACAAAGTGTAAAGCTTGCTCCTATTCAGA
CAGAATATATGCAACTCAGTTATGCCAAAGCAGCTGATATTGAAAAGCTCATCACGCAGAATAAAGGGGCCTCAAGTGCC
GGTTCTAATACAGGCAGTACAAGTGGAGATGATAAGGAGAGTCTACTGAGTTCACGTGGTTCTATTTCTATTGATGCACG
TACCAATACTTTAATTGTAAATGATACTCAGCCTTTTATCGATAAAATCCGCAATATGGTGGATCTGCTTGATGTACAGG
TAAAGCAGGTCATGGTTGAAGCACGTATTGTGCGTGCATCGACTGAATTCACCAAAGAAATCGGGGTGAAATGGGGAATT
CTTTCTCAGGGCATTACTAATAATAATAATCTATTAGTGGGTGGAAGTGACACTACACTTTGGGATTTGCGTGATCCTCA
AGAAAGTGATTTAGGTGGGTATACCTATGATATTCAACGCCCAGATAATTTGAATGTTGACTTGGGTGTTGCAAACCCTG
CTGGTCGAATTGCTTTTGGCTTGATTAGCTTATCTGACTTTATGTTAGATCTGGAGCTTTCTGCTTTACAAGCAGATGGT
TATGGTGAAGTGATCTCAACACCTAAAGTTTTAACAGCAGATAAGCAGGCGGCTAAAGTTTCATCAGGTACACAAATTCC
GTATCAATCTTCAGAAGGGGGTGGTGCAAATGCAGTTTCAACTACTGAATTTATTGATGCAACCCTCAGCTTAGATGTAA
CTCCTAGTATTACACCTGACGGTAAAGTTCAGATGCTGCTCAATATTACCAGTGATACTCCTGGAAACCCGACTCCAACG
GGTCAATTAACGATTAATAAAAATCAAATTAGCACTAATGTGCTGGTTGATAATGGAGAAACGGTAGTTTTGGGGGGAAT
TTTTGAGCAAGAAACACGGAATGGACAAACTAAAGTACCTTTCTTGGGAGATATTCCATATTTAGGTCATTTATTTCGTA
GAGATCTTAAATCTGACAATAAGCGTGAGCTCCTGATTTTTGTTACACCTCGAATTGTTAATGACAGTGTTTCAAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (306-348)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

• Bacterial type II/III secretion system short domain (Secretin_N) (376-456)

• AMIN domain (AMIN) (55-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	74.48	100	0.745
pilQ	Acinetobacter baumannii strain A118	74.341	100	0.743
comQ	Acinetobacter baylyi ADP1	69.274	99.307	0.688
pilQ	Pseudomonas aeruginosa PAK	41.81	96.533	0.404
pilQ	Legionella pneumophila strain Lp02	37.429	98.197	0.368
pilQ	Legionella pneumophila strain ERS1305867	37.822	96.81	0.366