Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | DPR03_RS01370 | Genome accession | NZ_CP030754 |
| Coordinates | 287034..287675 (+) | Length | 213 a.a. |
| NCBI ID | WP_005223471.1 | Uniprot ID | N9LSE7 |
| Organism | Acinetobacter schindleri strain H3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 282034..292675
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPR03_RS01355 | - | 282403..283206 (+) | 804 | WP_071319791.1 | putative RNA methyltransferase | - |
| DPR03_RS01360 | ponA | 283278..285806 (-) | 2529 | WP_071319792.1 | penicillin-binding protein PBP1a | - |
| DPR03_RS01365 | pilM | 285976..287034 (+) | 1059 | WP_004810013.1 | pilus assembly protein PilM | Machinery gene |
| DPR03_RS01370 | comN | 287034..287675 (+) | 642 | WP_005223471.1 | PilN domain-containing protein | Machinery gene |
| DPR03_RS01375 | comO | 287669..288388 (+) | 720 | WP_171260573.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DPR03_RS01380 | pilP | 288388..288915 (+) | 528 | WP_004810006.1 | pilus assembly protein PilP | Machinery gene |
| DPR03_RS01385 | pilQ | 288932..291097 (+) | 2166 | WP_071319794.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| DPR03_RS01390 | aroK | 291134..291670 (+) | 537 | WP_071319795.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23793.00 Da Isoelectric Point: 4.7690
>NTDB_id=301313 DPR03_RS01370 WP_005223471.1 287034..287675(+) (comN) [Acinetobacter schindleri strain H3]
MAKINLLPWRDELRIKRNNEFVAYCIGAFLLGVTAAGGSWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITKFDRVGDKFTIEGKAASPNTVAELLRNLEASTWYRNAFMNAFLV
AEENKDKAPSSVIPRVEESYGTFTVTVDLDQIAQPVLSEQQPQAAAAAGGATS
MAKINLLPWRDELRIKRNNEFVAYCIGAFLLGVTAAGGSWFYYDQKLQDQEQANQLIISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSDMYITKFDRVGDKFTIEGKAASPNTVAELLRNLEASTWYRNAFMNAFLV
AEENKDKAPSSVIPRVEESYGTFTVTVDLDQIAQPVLSEQQPQAAAAAGGATS
Nucleotide
Download Length: 642 bp
>NTDB_id=301313 DPR03_RS01370 WP_005223471.1 287034..287675(+) (comN) [Acinetobacter schindleri strain H3]
ATGGCAAAAATTAACTTACTTCCTTGGCGTGATGAGCTCAGGATAAAAAGAAATAACGAATTTGTCGCATATTGCATCGG
GGCCTTTTTGCTAGGGGTAACAGCAGCTGGAGGAAGCTGGTTCTACTATGATCAAAAATTACAGGATCAAGAACAAGCCA
ACCAACTCATCATCAGTACCAATCAGAATCTGGATGTACAGCTAAAATCTCTGGAAGGTTTACAGGAACAGCGTAATGCG
ATTGTGGAACGCATGAAACTGATTCAAGGTTTACAAACCCAGCGTCCAATTGCCGTACATCTTATTGACGAGATTGTACG
TGTGACACCAAGTGATATGTATATCACCAAGTTTGACCGTGTCGGTGATAAGTTCACCATTGAAGGTAAAGCAGCAAGTC
CAAATACGGTTGCAGAATTATTGCGTAATCTCGAAGCTTCTACCTGGTACCGTAATGCTTTCATGAATGCATTCCTGGTG
GCGGAAGAGAACAAGGACAAGGCGCCAAGCTCTGTTATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACAGT
GGATCTGGACCAGATTGCTCAACCGGTGCTTTCAGAACAACAGCCGCAAGCAGCTGCAGCAGCAGGAGGGGCAACATCAT
GA
ATGGCAAAAATTAACTTACTTCCTTGGCGTGATGAGCTCAGGATAAAAAGAAATAACGAATTTGTCGCATATTGCATCGG
GGCCTTTTTGCTAGGGGTAACAGCAGCTGGAGGAAGCTGGTTCTACTATGATCAAAAATTACAGGATCAAGAACAAGCCA
ACCAACTCATCATCAGTACCAATCAGAATCTGGATGTACAGCTAAAATCTCTGGAAGGTTTACAGGAACAGCGTAATGCG
ATTGTGGAACGCATGAAACTGATTCAAGGTTTACAAACCCAGCGTCCAATTGCCGTACATCTTATTGACGAGATTGTACG
TGTGACACCAAGTGATATGTATATCACCAAGTTTGACCGTGTCGGTGATAAGTTCACCATTGAAGGTAAAGCAGCAAGTC
CAAATACGGTTGCAGAATTATTGCGTAATCTCGAAGCTTCTACCTGGTACCGTAATGCTTTCATGAATGCATTCCTGGTG
GCGGAAGAGAACAAGGACAAGGCGCCAAGCTCTGTTATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACAGT
GGATCTGGACCAGATTGCTCAACCGGTGCTTTCAGAACAACAGCCGCAAGCAGCTGCAGCAGCAGGAGGGGCAACATCAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
69.378 |
98.122 |
0.681 |
| pilN | Acinetobacter baumannii D1279779 |
66.509 |
99.531 |
0.662 |