Detailed information NTG0301312

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: DPR03_RS01365
• Genome accession: NZ_CP030754
• Coordinates: 285976..287034 (+)
• Length: 352 a.a.
• NCBI ID: WP_004810013.1
• Uniprot ID: A0A1P8PN45
• Organism: Acinetobacter schindleri strain H3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 280976..292034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPR03_RS01350	mraY	281226..282344 (+)	1119	WP_048881757.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
DPR03_RS01355	-	282403..283206 (+)	804	WP_071319791.1	putative RNA methyltransferase	-
DPR03_RS01360	ponA	283278..285806 (-)	2529	WP_071319792.1	penicillin-binding protein PBP1a	-
DPR03_RS01365	pilM	285976..287034 (+)	1059	WP_004810013.1	pilus assembly protein PilM	Machinery gene
DPR03_RS01370	comN	287034..287675 (+)	642	WP_005223471.1	PilN domain-containing protein	Machinery gene
DPR03_RS01375	comO	287669..288388 (+)	720	WP_171260573.1	type 4a pilus biogenesis protein PilO	Machinery gene
DPR03_RS01380	pilP	288388..288915 (+)	528	WP_004810006.1	pilus assembly protein PilP	Machinery gene
DPR03_RS01385	pilQ	288932..291097 (+)	2166	WP_071319794.1	type IV pilus secretin PilQ family protein	Machinery gene
DPR03_RS01390	aroK	291134..291670 (+)	537	WP_071319795.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38961.55 Da
• Isoelectric Point: 4.6864

>NTDB_id=301312 DPR03_RS01365 WP_004810013.1 285976..287034(+) (pilM) [Acinetobacter schindleri strain H3]
MRRLYRKPNKGLIGVDISSTSVKVLELSMKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDALARAINLANTQSNQAAF
AIPTSMAITKTIEMDADMTSDEREVQIREDAEQYIPFPLDEASIDFEVLPDRLSNPNRVNVLLVATRIENVEARSEVLQI
AGITPKIADVESFALENAFRVFADTLPMGVNTVGILDIGHSMTTLSVMRNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=301312 DPR03_RS01365 WP_004810013.1 285976..287034(+) (pilM) [Acinetobacter schindleri strain H3]
GTGCGCAGGTTATATCGTAAGCCAAACAAGGGGTTAATAGGCGTCGACATCAGCTCGACTTCTGTTAAAGTTTTGGAACT
CTCTATGAAAAGCGGACGGTACTGGGTAGAAAGCTATGCTTTGGTCCCATTACCAGAAGGTAGTGTTGTTGAAAAAAACA
TCTTAAATCCAGAAGCCGTCGGTGATGCTTTGGCTCGTGCTATTAACTTGGCCAATACCCAATCTAACCAGGCTGCATTT
GCGATTCCTACGTCTATGGCGATCACCAAAACGATCGAAATGGATGCAGATATGACAAGTGATGAACGCGAAGTTCAAAT
TCGTGAAGATGCCGAACAATACATTCCATTCCCACTCGATGAAGCCAGCATTGACTTTGAAGTCTTGCCTGATCGATTGT
CTAATCCAAATCGTGTCAATGTTCTGTTGGTCGCAACCCGTATTGAAAATGTCGAAGCCCGGTCTGAAGTACTGCAAATC
GCGGGGATCACACCCAAGATTGCAGATGTAGAAAGCTTTGCATTGGAAAATGCTTTTAGGGTGTTTGCCGATACTTTACC
AATGGGCGTAAATACTGTCGGTATTCTGGATATTGGTCATAGCATGACAACTCTATCAGTCATGCGGAACAACAAGATTA
TTTATACCCGTGAGCAGGTGTTTGGGGGCAAGCAGCTGACTCAGGAAATCCAGAATCGTTATGGTCTGTCTTTTGAAGAA
GCGGGACGCGCCAAGAAAACACGTGCATTGCCAGATGACTATGATATTGAAGTCTTGGAGCCATTCTTGGATGCTGTGGT
GCAACAGGCAGCTCGTTCATTGCAGTTTTTCTTCTCATCTTCTCAGTTTAATGAAATTGACCATATCCTGTTGGCAGGAG
GGAATGCCAATATTCCGGGTCTGGCAAAATTATTACAGCAAAAGCTTGGTTACCGTGTCACGATCGCGAATCCATTTTTA
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCCTCACTCATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A1P8PN45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	83.807	100	0.838
comM	Acinetobacter nosocomialis M2	83.807	100	0.838
comM	Acinetobacter baylyi ADP1	78.125	100	0.781
pilM	Legionella pneumophila strain ERS1305867	39.266	100	0.395