Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | DPR03_RS01380 | Genome accession | NZ_CP030754 |
| Coordinates | 288388..288915 (+) | Length | 175 a.a. |
| NCBI ID | WP_004810006.1 | Uniprot ID | A0A1P8PN98 |
| Organism | Acinetobacter schindleri strain H3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 283388..293915
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPR03_RS01365 | pilM | 285976..287034 (+) | 1059 | WP_004810013.1 | pilus assembly protein PilM | Machinery gene |
| DPR03_RS01370 | comN | 287034..287675 (+) | 642 | WP_005223471.1 | PilN domain-containing protein | Machinery gene |
| DPR03_RS01375 | comO | 287669..288388 (+) | 720 | WP_171260573.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DPR03_RS01380 | pilP | 288388..288915 (+) | 528 | WP_004810006.1 | pilus assembly protein PilP | Machinery gene |
| DPR03_RS01385 | pilQ | 288932..291097 (+) | 2166 | WP_071319794.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| DPR03_RS01390 | aroK | 291134..291670 (+) | 537 | WP_071319795.1 | shikimate kinase AroK | - |
| DPR03_RS01395 | aroB | 291698..292777 (+) | 1080 | WP_071319796.1 | 3-dehydroquinate synthase | - |
| DPR03_RS01400 | - | 292791..293633 (+) | 843 | WP_071319797.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19156.31 Da Isoelectric Point: 7.2763
>NTDB_id=301315 DPR03_RS01380 WP_004810006.1 288388..288915(+) (pilP) [Acinetobacter schindleri strain H3]
MKMIKIASALTAGLILAGCESRIDVVNQEMANIRNQPALPIEPAPDFAPVETFSYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNLSRQLQPLESYPLETLTMKGSLKNQAGQIMALINTPDGEIERVQRGSYMGLNHGRVIHITPTQIDLIEIIPDGRDG
YVERPRSMVLIGPAP
MKMIKIASALTAGLILAGCESRIDVVNQEMANIRNQPALPIEPAPDFAPVETFSYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNLSRQLQPLESYPLETLTMKGSLKNQAGQIMALINTPDGEIERVQRGSYMGLNHGRVIHITPTQIDLIEIIPDGRDG
YVERPRSMVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=301315 DPR03_RS01380 WP_004810006.1 288388..288915(+) (pilP) [Acinetobacter schindleri strain H3]
ATGAAGATGATCAAGATTGCTTCAGCACTTACTGCCGGATTGATCCTGGCAGGTTGTGAATCACGTATTGATGTGGTCAA
TCAGGAAATGGCCAATATCCGCAATCAACCCGCATTGCCCATTGAGCCAGCACCCGATTTTGCTCCGGTTGAAACTTTTA
GTTATGCAGCACATCAGCTGAAAAGTCCTTTCTTGCCAAGTTCATTGGCAGCAGAACTGAAGATCATGGCAGGGAAACGG
GTTTATCCAAACCTATCACGTCAATTGCAACCCCTAGAAAGTTATCCGCTTGAAACTTTGACCATGAAAGGAAGTCTCAA
AAATCAGGCTGGACAGATTATGGCTTTAATTAATACGCCAGATGGGGAAATTGAACGTGTACAGCGCGGTAGTTATATGG
GACTTAATCATGGTCGGGTGATCCATATCACACCGACACAAATTGATCTGATCGAGATTATTCCAGATGGACGCGATGGC
TATGTGGAACGCCCTCGCAGTATGGTCCTGATTGGGCCTGCGCCATAA
ATGAAGATGATCAAGATTGCTTCAGCACTTACTGCCGGATTGATCCTGGCAGGTTGTGAATCACGTATTGATGTGGTCAA
TCAGGAAATGGCCAATATCCGCAATCAACCCGCATTGCCCATTGAGCCAGCACCCGATTTTGCTCCGGTTGAAACTTTTA
GTTATGCAGCACATCAGCTGAAAAGTCCTTTCTTGCCAAGTTCATTGGCAGCAGAACTGAAGATCATGGCAGGGAAACGG
GTTTATCCAAACCTATCACGTCAATTGCAACCCCTAGAAAGTTATCCGCTTGAAACTTTGACCATGAAAGGAAGTCTCAA
AAATCAGGCTGGACAGATTATGGCTTTAATTAATACGCCAGATGGGGAAATTGAACGTGTACAGCGCGGTAGTTATATGG
GACTTAATCATGGTCGGGTGATCCATATCACACCGACACAAATTGATCTGATCGAGATTATTCCAGATGGACGCGATGGC
TATGTGGAACGCCCTCGCAGTATGGTCCTGATTGGGCCTGCGCCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
73.143 |
100 |
0.731 |
| comL | Acinetobacter baylyi ADP1 |
71.598 |
96.571 |
0.691 |