Detailed information NTG0299250

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DPV67_RS03345
• Genome accession: NZ_CP030106
• Coordinates: 687207..687908 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain DA33382
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 682207..692908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPV67_RS03310 (DPV67_03310)	kdsB	682730..683491 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DPV67_RS03315 (DPV67_03315)	-	683503..684483 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
DPV67_RS03320 (DPV67_03320)	-	684495..684836 (+)	342	WP_001183027.1	PilZ domain-containing protein	-
DPV67_RS03325 (DPV67_03325)	-	684854..685627 (+)	774	WP_000497300.1	TatD family hydrolase	-
DPV67_RS03330 (DPV67_03330)	-	685665..686273 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DPV67_RS03335 (DPV67_03335)	-	686283..686837 (+)	555	WP_000841373.1	type II secretion system protein	-
DPV67_RS03340 (DPV67_03340)	xcpV	686827..687207 (+)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
DPV67_RS03345 (DPV67_03345)	xcpW	687207..687908 (+)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DPV67_RS03350 (DPV67_03350)	gspK	687908..688867 (+)	960	WP_072292244.1	type II secretion system minor pseudopilin GspK	-
DPV67_RS03355 (DPV67_03355)	-	689097..689693 (+)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
DPV67_RS03360 (DPV67_03360)	ung	689744..690457 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
DPV67_RS03365 (DPV67_03365)	-	690454..691578 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
DPV67_RS03370 (DPV67_03370)	tadA	691585..692088 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
DPV67_RS03375 (DPV67_03375)	-	692158..692601 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=299250 DPV67_RS03345 WP_000594579.1 687207..687908(+) (xcpW) [Acinetobacter baumannii strain DA33382]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=299250 DPV67_RS03345 WP_000594579.1 687207..687908(+) (xcpW) [Acinetobacter baumannii strain DA33382]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983