Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | CSC56_RS00700 | Genome accession | NZ_CP029652 |
| Coordinates | 81218..81529 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472255.1 | Uniprot ID | A0A0U1MLR1 |
| Organism | Staphylococcus aureus strain AR_0471 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 76218..86529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC56_RS00670 | - | 77001..77204 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| CSC56_RS00675 (CSC56_0087) | - | 77201..78187 (+) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| CSC56_RS00680 (CSC56_0088) | - | 78187..78516 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CSC56_RS00685 (CSC56_0089) | - | 78513..79136 (+) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| CSC56_RS00690 (CSC56_0090) | comGA | 79188..80162 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CSC56_RS00695 (CSC56_0091) | comGB | 80134..81204 (+) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CSC56_RS00700 (CSC56_0092) | comGC | 81218..81529 (+) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CSC56_RS00705 (CSC56_0093) | comGD | 81507..81953 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CSC56_RS00710 (CSC56_0094) | comGE | 81940..82221 (+) | 282 | WP_000844412.1 | hypothetical protein | Machinery gene |
| CSC56_RS00715 (CSC56_0095) | comGF | 82157..82654 (+) | 498 | WP_029694423.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CSC56_RS00720 | - | 82751..82897 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| CSC56_RS00725 (CSC56_0096) | - | 82887..83411 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| CSC56_RS00730 (CSC56_0097) | gcvT | 83570..84661 (+) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CSC56_RS00735 (CSC56_0098) | gcvPA | 84681..86027 (+) | 1347 | WP_103151974.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11301.33 Da Isoelectric Point: 8.5268
>NTDB_id=294530 CSC56_RS00700 WP_000472255.1 81218..81529(+) (comGC) [Staphylococcus aureus strain AR_0471]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGESITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGESITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=294530 CSC56_RS00700 WP_000472255.1 81218..81529(+) (comGC) [Staphylococcus aureus strain AR_0471]
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGTCAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGTCAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus mitis SK321 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |