Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CSC56_RS00710 | Genome accession | NZ_CP029652 |
| Coordinates | 81940..82221 (+) | Length | 93 a.a. |
| NCBI ID | WP_000844412.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0471 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 76940..87221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC56_RS00670 | - | 77001..77204 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| CSC56_RS00675 (CSC56_0087) | - | 77201..78187 (+) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| CSC56_RS00680 (CSC56_0088) | - | 78187..78516 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CSC56_RS00685 (CSC56_0089) | - | 78513..79136 (+) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| CSC56_RS00690 (CSC56_0090) | comGA | 79188..80162 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CSC56_RS00695 (CSC56_0091) | comGB | 80134..81204 (+) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CSC56_RS00700 (CSC56_0092) | comGC | 81218..81529 (+) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CSC56_RS00705 (CSC56_0093) | comGD | 81507..81953 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CSC56_RS00710 (CSC56_0094) | comGE | 81940..82221 (+) | 282 | WP_000844412.1 | hypothetical protein | Machinery gene |
| CSC56_RS00715 (CSC56_0095) | comGF | 82157..82654 (+) | 498 | WP_029694423.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CSC56_RS00720 | - | 82751..82897 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| CSC56_RS00725 (CSC56_0096) | - | 82887..83411 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| CSC56_RS00730 (CSC56_0097) | gcvT | 83570..84661 (+) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CSC56_RS00735 (CSC56_0098) | gcvPA | 84681..86027 (+) | 1347 | WP_103151974.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 93 a.a. Molecular weight: 10356.32 Da Isoelectric Point: 10.0183
>NTDB_id=294532 CSC56_RS00710 WP_000844412.1 81940..82221(+) (comGE) [Staphylococcus aureus strain AR_0471]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQ
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQ
Nucleotide
Download Length: 282 bp
>NTDB_id=294532 CSC56_RS00710 WP_000844412.1 81940..82221(+) (comGE) [Staphylococcus aureus strain AR_0471]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAATAG
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.111 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.925 |
100 |
0.989 |