Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | DG474_RS03295 | Genome accession | NZ_CP029257 |
| Coordinates | 657223..657693 (+) | Length | 156 a.a. |
| NCBI ID | WP_000609596.1 | Uniprot ID | A0A139PWT6 |
| Organism | Streptococcus oralis strain CCUG 53468 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 652223..662693
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DG474_RS03265 (DG474_03335) | - | 652408..652956 (-) | 549 | WP_042902725.1 | NADPH-dependent FMN reductase | - |
| DG474_RS03270 (DG474_03340) | - | 653048..653494 (-) | 447 | WP_255778797.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| DG474_RS03275 (DG474_03345) | - | 653613..654089 (+) | 477 | WP_255778798.1 | DUF5590 domain-containing protein | - |
| DG474_RS03280 (DG474_03350) | - | 654099..655277 (+) | 1179 | WP_042902728.1 | pyridoxal phosphate-dependent aminotransferase | - |
| DG474_RS03285 (DG474_03355) | asnS | 655427..656773 (+) | 1347 | WP_200872128.1 | asparagine--tRNA ligase | - |
| DG474_RS03290 (DG474_03360) | rpsF | 656921..657211 (+) | 291 | WP_002896497.1 | 30S ribosomal protein S6 | - |
| DG474_RS03295 (DG474_03365) | ssbA | 657223..657693 (+) | 471 | WP_000609596.1 | single-stranded DNA-binding protein SsbA | Machinery gene |
| DG474_RS03300 (DG474_03370) | rpsR | 657725..657964 (+) | 240 | WP_000068664.1 | 30S ribosomal protein S18 | - |
| DG474_RS03305 (DG474_03375) | - | 658297..658806 (+) | 510 | WP_000858591.1 | GNAT family N-acetyltransferase | - |
| DG474_RS03310 (DG474_03380) | wecB | 659247..660395 (+) | 1149 | WP_000734436.1 | non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase | - |
| DG474_RS03315 (DG474_03385) | - | 660402..661181 (+) | 780 | WP_000800615.1 | hypothetical protein | - |
| DG474_RS03320 (DG474_03390) | - | 661324..662634 (+) | 1311 | WP_000625492.1 | glycosyltransferase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17196.10 Da Isoelectric Point: 5.2065
>NTDB_id=291410 DG474_RS03295 WP_000609596.1 657223..657693(+) (ssbA) [Streptococcus oralis strain CCUG 53468]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHTGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHTGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=291410 DG474_RS03295 WP_000609596.1 657223..657693(+) (ssbA) [Streptococcus oralis strain CCUG 53468]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGATGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTCATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGTGAAGGACATACAGGTGGAGCTTATTCTGCACCAACTGCTGGTCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTTGGAGCAACAAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGATGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTCATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGTGAAGGACATACAGGTGGAGCTTATTCTGCACCAACTGCTGGTCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTTGGAGCAACAAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.651 |
100 |
0.603 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.841 |
100 |
0.596 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
50.427 |
75 |
0.378 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
54.128 |
69.872 |
0.378 |
| ssb | Neisseria gonorrhoeae MS11 |
33.714 |
100 |
0.378 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus mitis SK321 |
49.573 |
75 |
0.372 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.717 |
67.949 |
0.372 |
| ssb | Neisseria meningitidis MC58 |
32.571 |
100 |
0.365 |