Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BCER98_RS08425 | Genome accession | NC_009674 |
| Coordinates | 1718377..1718715 (+) | Length | 112 a.a. |
| NCBI ID | WP_041809657.1 | Uniprot ID | A0AAX2CG79 |
| Organism | Bacillus cytotoxicus NVH 391-98 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1713377..1723715
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCER98_RS08405 (Bcer98_1611) | - | 1713813..1714466 (-) | 654 | WP_012094095.1 | hypothetical protein | - |
| BCER98_RS08410 (Bcer98_1612) | - | 1714575..1715222 (+) | 648 | WP_012094096.1 | HD domain-containing protein | - |
| BCER98_RS08415 (Bcer98_1613) | - | 1715219..1717111 (+) | 1893 | WP_012094097.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| BCER98_RS08420 (Bcer98_1614) | - | 1717187..1717918 (+) | 732 | WP_012094098.1 | Bax inhibitor-1/YccA family protein | - |
| BCER98_RS08425 (Bcer98_1615) | ssbA | 1718377..1718715 (+) | 339 | WP_041809657.1 | single-stranded DNA-binding protein | Machinery gene |
| BCER98_RS08430 (Bcer98_1616) | - | 1718872..1719999 (+) | 1128 | WP_012094100.1 | conserved virulence factor C family protein | - |
| BCER98_RS08435 (Bcer98_1617) | - | 1720001..1720384 (+) | 384 | WP_012094101.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| BCER98_RS08440 (Bcer98_1618) | - | 1720469..1720903 (+) | 435 | WP_012094102.1 | BrxA/BrxB family bacilliredoxin | - |
| BCER98_RS08445 (Bcer98_1619) | - | 1720957..1721733 (+) | 777 | WP_012094103.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 13080.04 Da Isoelectric Point: 9.7832
>NTDB_id=28643 BCER98_RS08425 WP_041809657.1 1718377..1718715(+) (ssbA) [Bacillus cytotoxicus NVH 391-98]
MMNRVVLVGRLTKDPELYYTKQGIPYARICIAVNRGFRNSLGEQQADYIYCVVWRKSAENVLEYCRKGSLVGITGRIHTS
NYENDQGKRIYRTEVVIERITFLERKREISNG
MMNRVVLVGRLTKDPELYYTKQGIPYARICIAVNRGFRNSLGEQQADYIYCVVWRKSAENVLEYCRKGSLVGITGRIHTS
NYENDQGKRIYRTEVVIERITFLERKREISNG
Nucleotide
Download Length: 339 bp
>NTDB_id=28643 BCER98_RS08425 WP_041809657.1 1718377..1718715(+) (ssbA) [Bacillus cytotoxicus NVH 391-98]
ATGATGAATCGAGTTGTATTAGTTGGAAGATTAACAAAAGATCCAGAATTATACTATACAAAGCAAGGAATTCCTTATGC
GCGTATTTGTATTGCTGTAAATAGAGGATTTCGAAATAGTTTAGGGGAACAACAAGCAGATTATATTTATTGTGTTGTTT
GGAGAAAGTCGGCTGAGAATGTATTAGAGTACTGCCGGAAAGGTTCTCTCGTTGGCATTACGGGCCGTATTCATACGAGC
AATTACGAGAATGATCAAGGAAAGAGAATATATAGAACAGAAGTTGTAATTGAAAGAATTACGTTTTTAGAAAGGAAAAG
AGAGATTTCAAATGGATGA
ATGATGAATCGAGTTGTATTAGTTGGAAGATTAACAAAAGATCCAGAATTATACTATACAAAGCAAGGAATTCCTTATGC
GCGTATTTGTATTGCTGTAAATAGAGGATTTCGAAATAGTTTAGGGGAACAACAAGCAGATTATATTTATTGTGTTGTTT
GGAGAAAGTCGGCTGAGAATGTATTAGAGTACTGCCGGAAAGGTTCTCTCGTTGGCATTACGGGCCGTATTCATACGAGC
AATTACGAGAATGATCAAGGAAAGAGAATATATAGAACAGAAGTTGTAATTGAAAGAATTACGTTTTTAGAAAGGAAAAG
AGAGATTTCAAATGGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
94.643 |
0.554 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.717 |
94.643 |
0.518 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
53.774 |
94.643 |
0.509 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.667 |
96.429 |
0.402 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
39.623 |
94.643 |
0.375 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
39.623 |
94.643 |
0.375 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
43.158 |
84.821 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
38.679 |
94.643 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
38.679 |
94.643 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
38.679 |
94.643 |
0.366 |
| ssbB/cilA | Streptococcus mitis SK321 |
38.679 |
94.643 |
0.366 |
| ssbA | Streptococcus mutans UA159 |
38.679 |
94.643 |
0.366 |