Detailed information NTG0259158

Bioinformatically predicted

Overview

• Name: ssbB
• Type: Machinery gene
• Locus tag: CXG95_RS00920
• Genome accession: NZ_CP025226
• Coordinates: 183030..183377 (+)
• Length: 115 a.a.
• NCBI ID: WP_061565986.1
• Uniprot ID: A0A8B5YAR4
• Organism: Bacillus licheniformis strain PB3
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 178030..188377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXG95_RS00890 (CXG95_00885)	-	179129..179968 (+)	840	WP_003185907.1	flagellar hook-basal body protein	-
CXG95_RS00895 (CXG95_00890)	-	180012..180839 (+)	828	WP_003185904.1	flagellar hook-basal body protein	-
CXG95_RS00900 (CXG95_00895)	fabZ	181033..181467 (+)	435	WP_003185902.1	3-hydroxyacyl-ACP dehydratase FabZ	-
CXG95_RS00905 (CXG95_00900)	mscL	181537..181917 (+)	381	WP_061565987.1	large conductance mechanosensitive channel protein MscL	-
CXG95_RS00910 (CXG95_00905)	-	181958..182371 (-)	414	WP_003185898.1	YwpF-like family protein	-
CXG95_RS00915 (CXG95_00910)	-	182553..182924 (+)	372	WP_003185895.1	hypothetical protein	-
CXG95_RS00920 (CXG95_00915)	ssbB	183030..183377 (+)	348	WP_061565986.1	single-stranded DNA-binding protein	Machinery gene
CXG95_RS00925 (CXG95_00920)	-	183599..184561 (+)	963	WP_003185891.1	sugar-binding transcriptional regulator	-
CXG95_RS00930 (CXG95_00925)	-	184558..185001 (+)	444	WP_003185888.1	transcriptional regulator GutM	-
CXG95_RS00935 (CXG95_00930)	-	184998..185546 (+)	549	WP_061565985.1	PTS glucitol/sorbitol transporter subunit IIC	-
CXG95_RS00940 (CXG95_00935)	-	185564..186571 (+)	1008	WP_003185884.1	PTS glucitol/sorbitol transporter subunit IIB	-
CXG95_RS00945 (CXG95_00940)	-	186596..186967 (+)	372	WP_003185882.1	PTS glucitol/sorbitol transporter subunit IIA	-
CXG95_RS00950 (CXG95_00945)	srlD	186982..187767 (+)	786	WP_003185881.1	sorbitol-6-phosphate dehydrogenase	-

Sequence

Protein

• Length: 115 a.a.
• Molecular weight: 12767.47 Da
• Isoelectric Point: 6.9538

>NTDB_id=259158 CXG95_RS00920 WP_061565986.1 183030..183377(+) (ssbB) [Bacillus licheniformis strain PB3]
MFNEIMLVGRLTKDPELRYTSDGVPVANVTLAVSRPFKNAAGEVEADFVNCTLWRKTAVNTAEYCEKGSIIGLSGRIQTR
QYVNSEGERTFITEVVARTVRFLGESRKAHEPADA

Nucleotide

• Length: 348 bp

>NTDB_id=259158 CXG95_RS00920 WP_061565986.1 183030..183377(+) (ssbB) [Bacillus licheniformis strain PB3]
ATGTTTAATGAGATCATGCTCGTCGGGCGTTTGACAAAAGATCCCGAACTGCGGTATACATCTGACGGTGTCCCTGTTGC
AAATGTGACGCTGGCTGTCAGCAGGCCTTTCAAGAACGCAGCAGGCGAAGTAGAAGCGGACTTTGTCAATTGCACTCTAT
GGCGCAAAACTGCCGTGAACACAGCCGAATATTGCGAAAAAGGCTCCATCATCGGGCTGAGCGGAAGAATCCAGACCCGC
CAATACGTCAATTCAGAAGGCGAACGCACCTTTATTACAGAAGTTGTCGCCCGGACAGTCAGATTTTTGGGAGAAAGCCG
GAAAGCGCATGAGCCGGCTGATGCTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A8B5YAR4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB	Bacillus subtilis subsp. subtilis str. 168	71.845	89.565	0.643
ssbA	Bacillus subtilis subsp. subtilis str. 168	58.252	89.565	0.522
ssb	Latilactobacillus sakei subsp. sakei 23K	51.351	96.522	0.496
ssbA	Streptococcus mutans UA159	44.86	93.043	0.417
ssbB/cilA	Streptococcus mitis NCTC 12261	42.991	93.043	0.4
ssbB	Streptococcus sobrinus strain NIDR 6715-7	42.991	93.043	0.4
ssbB/cilA	Streptococcus pneumoniae TIGR4	42.991	93.043	0.4
ssbB	Lactococcus lactis subsp. cremoris KW2	43.396	92.174	0.4
ssbB/cilA	Streptococcus mitis SK321	42.056	93.043	0.391
ssbB/cilA	Streptococcus pneumoniae Rx1	42.056	93.043	0.391
ssbB/cilA	Streptococcus pneumoniae D39	42.056	93.043	0.391
ssbB/cilA	Streptococcus pneumoniae R6	42.056	93.043	0.391