Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | CU118_RS05275 | Genome accession | NZ_CP024998 |
| Coordinates | 1062493..1062804 (-) | Length | 103 a.a. |
| NCBI ID | WP_054190026.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 55-99-44 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1057493..1067804
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU118_RS05240 (CU118_05240) | gcvPA | 1057995..1059341 (-) | 1347 | WP_054190021.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CU118_RS05245 (CU118_05245) | gcvT | 1059361..1060452 (-) | 1092 | WP_054190022.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CU118_RS05250 (CU118_05250) | - | 1060611..1061135 (-) | 525 | WP_054190023.1 | shikimate kinase | - |
| CU118_RS05255 (CU118_05255) | - | 1061125..1061271 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CU118_RS05260 (CU118_05260) | comGF | 1061368..1061865 (-) | 498 | WP_077446653.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CU118_RS05265 (CU118_05265) | comGE | 1061783..1062082 (-) | 300 | WP_054190024.1 | hypothetical protein | Machinery gene |
| CU118_RS05270 (CU118_05270) | comGD | 1062069..1062515 (-) | 447 | WP_077446655.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CU118_RS05275 (CU118_05275) | comGC | 1062493..1062804 (-) | 312 | WP_054190026.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CU118_RS05280 (CU118_05280) | comGB | 1062818..1063888 (-) | 1071 | WP_054190027.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CU118_RS05285 (CU118_05285) | comGA | 1063860..1064834 (-) | 975 | WP_054191886.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CU118_RS05290 (CU118_05290) | - | 1064886..1065509 (-) | 624 | WP_054190028.1 | MBL fold metallo-hydrolase | - |
| CU118_RS05295 (CU118_05295) | - | 1065506..1065835 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CU118_RS05300 (CU118_05300) | - | 1065835..1066821 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| CU118_RS05305 (CU118_05305) | - | 1066818..1067021 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11329.38 Da Isoelectric Point: 8.5268
>NTDB_id=257014 CU118_RS05275 WP_054190026.1 1062493..1062804(-) (comGC) [Staphylococcus aureus strain 55-99-44]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIAEGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIAEGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=257014 CU118_RS05275 WP_054190026.1 1062493..1062804(-) (comGC) [Staphylococcus aureus strain 55-99-44]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGAGGGTTTCATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGAGGGTTTCATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae D39 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae R6 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus mitis SK321 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50 |
83.495 |
0.417 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
42.857 |
88.35 |
0.379 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |