Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CPZ87_RS30520 | Genome accession | NZ_CP024645 |
| Coordinates | 268719..269144 (+) | Length | 141 a.a. |
| NCBI ID | WP_085748873.1 | Uniprot ID | A0A1W6L2Z5 |
| Organism | Piscinibacter gummiphilus strain NBRC 109400 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 263719..274144
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ87_RS01190 (CPZ87_01190) | - | 264124..265377 (+) | 1254 | WP_085748868.1 | serine/threonine-protein kinase | - |
| CPZ87_RS01195 (CPZ87_01195) | - | 265439..266221 (+) | 783 | WP_085748869.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| CPZ87_RS01200 (CPZ87_01200) | - | 266304..266987 (+) | 684 | WP_085748870.1 | FHA domain-containing protein | - |
| CPZ87_RS01205 (CPZ87_01205) | - | 267247..268023 (+) | 777 | WP_085748871.1 | MBL fold metallo-hydrolase | - |
| CPZ87_RS01210 (CPZ87_01210) | pilA2 | 268234..268656 (+) | 423 | WP_085748872.1 | pilin | Machinery gene |
| CPZ87_RS30520 (CPZ87_01215) | pilA | 268719..269144 (+) | 426 | WP_085748873.1 | pilin | Machinery gene |
| CPZ87_RS01220 (CPZ87_01220) | - | 269141..270997 (+) | 1857 | WP_085748874.1 | Wzy polymerase domain-containing protein | - |
| CPZ87_RS01225 (CPZ87_01225) | tfpZ | 271095..271886 (+) | 792 | WP_085748875.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| CPZ87_RS01230 (CPZ87_01230) | - | 271933..273705 (+) | 1773 | WP_099959835.1 | PglL family O-oligosaccharyltransferase | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15012.24 Da Isoelectric Point: 7.8529
>NTDB_id=254700 CPZ87_RS30520 WP_085748873.1 268719..269144(+) (pilA) [Piscinibacter gummiphilus strain NBRC 109400]
MRVQRGFTLIELMIVVAIIGILAALALPAYQDYVKRARVSEGLGLATGVKHMVTEYFASNSQWPTSNSAAGAAEPAEIQG
HSVRSVTVTNNGVIQIAFRENVQDGALLELLPTSAALQVNWTCRSPASGGLPGKYVPSECR
MRVQRGFTLIELMIVVAIIGILAALALPAYQDYVKRARVSEGLGLATGVKHMVTEYFASNSQWPTSNSAAGAAEPAEIQG
HSVRSVTVTNNGVIQIAFRENVQDGALLELLPTSAALQVNWTCRSPASGGLPGKYVPSECR
Nucleotide
Download Length: 426 bp
>NTDB_id=254700 CPZ87_RS30520 WP_085748873.1 268719..269144(+) (pilA) [Piscinibacter gummiphilus strain NBRC 109400]
ATGCGCGTTCAACGCGGCTTCACCCTGATCGAGCTGATGATCGTGGTCGCCATCATCGGCATTCTGGCCGCATTGGCGCT
GCCGGCGTACCAGGACTATGTCAAGCGCGCACGGGTTTCCGAGGGACTCGGCCTGGCAACGGGTGTCAAGCACATGGTGA
CCGAGTACTTTGCGTCCAACTCGCAGTGGCCGACCAGCAACAGCGCCGCTGGTGCCGCCGAGCCGGCCGAAATTCAGGGC
CACAGCGTGCGTTCGGTGACCGTCACGAACAACGGCGTGATCCAGATCGCCTTCCGCGAAAACGTGCAGGATGGCGCATT
GCTGGAACTCCTGCCGACCAGCGCCGCGCTCCAGGTCAACTGGACCTGCCGTTCGCCCGCGTCGGGTGGACTTCCCGGCA
AGTACGTGCCGAGCGAGTGCCGATGA
ATGCGCGTTCAACGCGGCTTCACCCTGATCGAGCTGATGATCGTGGTCGCCATCATCGGCATTCTGGCCGCATTGGCGCT
GCCGGCGTACCAGGACTATGTCAAGCGCGCACGGGTTTCCGAGGGACTCGGCCTGGCAACGGGTGTCAAGCACATGGTGA
CCGAGTACTTTGCGTCCAACTCGCAGTGGCCGACCAGCAACAGCGCCGCTGGTGCCGCCGAGCCGGCCGAAATTCAGGGC
CACAGCGTGCGTTCGGTGACCGTCACGAACAACGGCGTGATCCAGATCGCCTTCCGCGAAAACGTGCAGGATGGCGCATT
GCTGGAACTCCTGCCGACCAGCGCCGCGCTCCAGGTCAACTGGACCTGCCGTTCGCCCGCGTCGGGTGGACTTCCCGGCA
AGTACGTGCCGAGCGAGTGCCGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
43.713 |
100 |
0.518 |
| pilE | Neisseria gonorrhoeae MS11 |
43.59 |
100 |
0.482 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
43.312 |
100 |
0.482 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.518 |
100 |
0.475 |
| pilA2 | Legionella pneumophila str. Paris |
47.518 |
100 |
0.475 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
34.225 |
100 |
0.454 |
| comP | Acinetobacter baylyi ADP1 |
40 |
100 |
0.426 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.667 |
100 |
0.411 |
| pilA | Acinetobacter baumannii strain A118 |
35.811 |
100 |
0.376 |
| pilA | Haemophilus influenzae 86-028NP |
36.62 |
100 |
0.369 |