Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CG475_RS09220 | Genome accession | NZ_CP024096 |
| Coordinates | 1779922..1780260 (+) | Length | 112 a.a. |
| NCBI ID | WP_041809657.1 | Uniprot ID | A0AAX2CG79 |
| Organism | Bacillus cytotoxicus strain CH_39 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1774922..1785260
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG475_RS09200 (CG475_009185) | - | 1775358..1776011 (-) | 654 | WP_012094095.1 | hypothetical protein | - |
| CG475_RS09205 (CG475_009190) | - | 1776120..1776767 (+) | 648 | WP_087094850.1 | HD domain-containing protein | - |
| CG475_RS09210 (CG475_009195) | - | 1776764..1778656 (+) | 1893 | WP_087094851.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| CG475_RS09215 (CG475_009200) | - | 1778732..1779463 (+) | 732 | WP_087094852.1 | Bax inhibitor-1/YccA family protein | - |
| CG475_RS09220 (CG475_009205) | ssbA | 1779922..1780260 (+) | 339 | WP_041809657.1 | single-stranded DNA-binding protein | Machinery gene |
| CG475_RS09225 (CG475_009210) | - | 1780417..1781544 (+) | 1128 | WP_048722873.1 | conserved virulence factor C family protein | - |
| CG475_RS09230 (CG475_009215) | - | 1781546..1781929 (+) | 384 | WP_012094101.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| CG475_RS09235 (CG475_009220) | - | 1782014..1782448 (+) | 435 | WP_012094102.1 | BrxA/BrxB family bacilliredoxin | - |
| CG475_RS09240 (CG475_009225) | - | 1782502..1783278 (+) | 777 | WP_087094853.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 13080.04 Da Isoelectric Point: 9.7832
>NTDB_id=251821 CG475_RS09220 WP_041809657.1 1779922..1780260(+) (ssbA) [Bacillus cytotoxicus strain CH_39]
MMNRVVLVGRLTKDPELYYTKQGIPYARICIAVNRGFRNSLGEQQADYIYCVVWRKSAENVLEYCRKGSLVGITGRIHTS
NYENDQGKRIYRTEVVIERITFLERKREISNG
MMNRVVLVGRLTKDPELYYTKQGIPYARICIAVNRGFRNSLGEQQADYIYCVVWRKSAENVLEYCRKGSLVGITGRIHTS
NYENDQGKRIYRTEVVIERITFLERKREISNG
Nucleotide
Download Length: 339 bp
>NTDB_id=251821 CG475_RS09220 WP_041809657.1 1779922..1780260(+) (ssbA) [Bacillus cytotoxicus strain CH_39]
ATGATGAATCGAGTTGTATTAGTTGGAAGATTAACAAAAGATCCAGAATTATACTATACAAAGCAAGGAATTCCTTATGC
ACGTATTTGTATTGCTGTAAATAGAGGATTTCGAAATAGTTTAGGGGAACAACAAGCAGATTATATTTATTGTGTTGTTT
GGAGAAAGTCAGCTGAGAATGTATTAGAGTACTGCCGGAAAGGTTCTCTCGTTGGCATTACGGGCCGTATTCATACGAGC
AATTACGAGAATGATCAAGGAAAGAGAATATATAGAACAGAAGTTGTAATTGAAAGAATTACGTTTTTAGAAAGGAAAAG
AGAGATTTCAAATGGATGA
ATGATGAATCGAGTTGTATTAGTTGGAAGATTAACAAAAGATCCAGAATTATACTATACAAAGCAAGGAATTCCTTATGC
ACGTATTTGTATTGCTGTAAATAGAGGATTTCGAAATAGTTTAGGGGAACAACAAGCAGATTATATTTATTGTGTTGTTT
GGAGAAAGTCAGCTGAGAATGTATTAGAGTACTGCCGGAAAGGTTCTCTCGTTGGCATTACGGGCCGTATTCATACGAGC
AATTACGAGAATGATCAAGGAAAGAGAATATATAGAACAGAAGTTGTAATTGAAAGAATTACGTTTTTAGAAAGGAAAAG
AGAGATTTCAAATGGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
94.643 |
0.554 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.717 |
94.643 |
0.518 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
53.774 |
94.643 |
0.509 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.667 |
96.429 |
0.402 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
39.623 |
94.643 |
0.375 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
39.623 |
94.643 |
0.375 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
43.158 |
84.821 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
38.679 |
94.643 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
38.679 |
94.643 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
38.679 |
94.643 |
0.366 |
| ssbB/cilA | Streptococcus mitis SK321 |
38.679 |
94.643 |
0.366 |
| ssbA | Streptococcus mutans UA159 |
38.679 |
94.643 |
0.366 |