Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CO686_RS02525 | Genome accession | NZ_CP023507 |
| Coordinates | 486794..487264 (+) | Length | 156 a.a. |
| NCBI ID | WP_000609596.1 | Uniprot ID | A0A139PWT6 |
| Organism | Streptococcus oralis strain FDAARGOS_367 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 481794..492264
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO686_RS02495 (CO686_02495) | - | 481977..482525 (-) | 549 | WP_000039632.1 | NADPH-dependent FMN reductase | - |
| CO686_RS02500 (CO686_02500) | - | 482617..483063 (-) | 447 | WP_000816316.1 | MarR family transcriptional regulator | - |
| CO686_RS02505 (CO686_02505) | - | 483183..483659 (+) | 477 | WP_000776855.1 | DUF5590 domain-containing protein | - |
| CO686_RS02510 (CO686_02510) | - | 483669..484847 (+) | 1179 | WP_000777443.1 | pyridoxal phosphate-dependent aminotransferase | - |
| CO686_RS02515 (CO686_02515) | asnS | 484997..486343 (+) | 1347 | WP_172844182.1 | asparagine--tRNA ligase | - |
| CO686_RS02520 (CO686_02520) | rpsF | 486492..486782 (+) | 291 | WP_001151782.1 | 30S ribosomal protein S6 | - |
| CO686_RS02525 (CO686_02525) | ssbA | 486794..487264 (+) | 471 | WP_000609596.1 | single-stranded DNA-binding protein SsbA | Machinery gene |
| CO686_RS02530 (CO686_02530) | rpsR | 487296..487535 (+) | 240 | WP_000068664.1 | 30S ribosomal protein S18 | - |
| CO686_RS02535 (CO686_02535) | - | 487794..488303 (+) | 510 | WP_025172573.1 | GNAT family N-acetyltransferase | - |
| CO686_RS02540 (CO686_02540) | wecB | 488741..489898 (+) | 1158 | WP_007521309.1 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) | - |
| CO686_RS02545 (CO686_02545) | - | 489895..490674 (+) | 780 | WP_049500900.1 | hypothetical protein | - |
| CO686_RS02555 (CO686_02555) | - | 490816..492126 (+) | 1311 | WP_000625365.1 | glycosyltransferase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17196.10 Da Isoelectric Point: 5.2065
>NTDB_id=247849 CO686_RS02525 WP_000609596.1 486794..487264(+) (ssbA) [Streptococcus oralis strain FDAARGOS_367]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHTGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHTGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=247849 CO686_RS02525 WP_000609596.1 486794..487264(+) (ssbA) [Streptococcus oralis strain FDAARGOS_367]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACTCGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTCAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGCGAAGGACATACAGGTGGGGCTTATTCTGCACCAACTGCTGGTCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTCGGAGCAACCAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACTCGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTCAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGCGAAGGACATACAGGTGGGGCTTATTCTGCACCAACTGCTGGTCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTCGGAGCAACCAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.651 |
100 |
0.603 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.841 |
100 |
0.596 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
50.427 |
75 |
0.378 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
54.128 |
69.872 |
0.378 |
| ssb | Neisseria gonorrhoeae MS11 |
33.714 |
100 |
0.378 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
49.573 |
75 |
0.372 |
| ssbB/cilA | Streptococcus mitis SK321 |
49.573 |
75 |
0.372 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.717 |
67.949 |
0.372 |
| ssb | Neisseria meningitidis MC58 |
32.571 |
100 |
0.365 |