Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | S101392_RS18890 | Genome accession | NZ_CP021921 |
| Coordinates | 3671694..3672035 (-) | Length | 113 a.a. |
| NCBI ID | WP_003227798.1 | Uniprot ID | C0SPB6 |
| Organism | Bacillus subtilis subsp. subtilis strain SRCM101392 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3666694..3677035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101392_RS18875 (S101392_03738) | hepAB | 3666935..3669703 (+) | 2769 | WP_088327135.1 | DEAD/DEAH box helicase | - |
| S101392_RS18880 (S101392_03739) | ywpJ | 3669831..3670688 (-) | 858 | WP_088327137.1 | phosphatase YwpJ | - |
| S101392_RS18885 (S101392_03740) | glcR | 3670694..3671470 (-) | 777 | WP_003244075.1 | transcriptional regulator GlcR | - |
| S101392_RS18890 (S101392_03741) | ssbB | 3671694..3672035 (-) | 342 | WP_003227798.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| S101392_RS18895 (S101392_03742) | ywpG | 3672112..3672495 (-) | 384 | WP_015714843.1 | DynA interaction protein YwpG | - |
| S101392_RS18900 (S101392_03743) | ywpF | 3672670..3673080 (+) | 411 | WP_014481144.1 | YwpF-like family protein | - |
| S101392_RS18905 (S101392_03744) | - | 3673220..3673858 (-) | 639 | WP_174222757.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12520.15 Da Isoelectric Point: 6.9498
>NTDB_id=234995 S101392_RS18890 WP_003227798.1 3671694..3672035(-) (ssbB) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENEEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENEEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=234995 S101392_RS18890 WP_003227798.1 3671694..3672035(-) (ssbB) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGAGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGAGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |