Detailed information NTG0228017

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MCCS_RS05235
• Genome accession: NZ_CP021059
• Coordinates: 1026175..1026897 (+)
• Length: 240 a.a.
• NCBI ID: WP_226997666.1
• Uniprot ID: -
• Organism: Macrococcoides canis strain KM 45013
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1021175..1031897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MCCS_RS05215 (MCCS_10700)	ylqF	1022028..1022900 (+)	873	WP_086042370.1	ribosome biogenesis GTPase YlqF	-
MCCS_RS05220 (MCCS_10710)	-	1022890..1023678 (+)	789	WP_086042371.1	ribonuclease HII	-
MCCS_RS05225 (MCCS_10720)	sucC	1023784..1024953 (+)	1170	WP_086042372.1	ADP-forming succinate--CoA ligase subunit beta	-
MCCS_RS05230 (MCCS_10730)	sucD	1024969..1025877 (+)	909	WP_086042373.1	succinate--CoA ligase subunit alpha	-
MCCS_RS05235 (MCCS_10740)	dprA	1026175..1026897 (+)	723	WP_226997666.1	DNA-processing protein DprA	Machinery gene
MCCS_RS05240 (MCCS_10750)	topA	1026983..1029052 (+)	2070	WP_086042375.1	type I DNA topoisomerase	-
MCCS_RS05245 (MCCS_10760)	trmFO	1029218..1030519 (+)	1302	WP_086042376.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
MCCS_RS05250 (MCCS_10770)	xerC	1030579..1031451 (+)	873	WP_086042377.1	tyrosine recombinase XerC	-

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 26928.80 Da
• Isoelectric Point: 5.6600

>NTDB_id=228017 MCCS_RS05235 WP_226997666.1 1026175..1026897(+) (dprA) [Macrococcoides canis strain KM 45013]
MTKFQNLKSSMLLEELESKEITPLYFDSETYPKILLEIYDYPFILFTKGNINILNYSNALAIVGSRDATNYTANALDQIV
PELIKNNIFIVSGLAKGADNYAHLACNFYGGHTIGVLAYGHDFVYPAETALIRKLMEKNHIVISEYPPSTPIQKFRFPER
NRIISGLAQGVLITEAKERSGSLITLDQGLEQDRNIYCLPGPINHELSSGCNKRIKEGAKLVQCAQDILEDYSFPDISKN

Nucleotide

• Length: 723 bp

>NTDB_id=228017 MCCS_RS05235 WP_226997666.1 1026175..1026897(+) (dprA) [Macrococcoides canis strain KM 45013]
TTGACAAAATTTCAGAATCTTAAGAGCAGCATGCTACTTGAAGAGCTTGAAAGCAAGGAGATTACCCCACTTTATTTTGA
CTCTGAAACGTACCCCAAAATACTGCTTGAAATTTATGATTACCCTTTCATTTTATTCACAAAAGGCAATATTAATATCC
TTAATTATTCGAATGCTTTAGCGATTGTAGGGAGCAGGGATGCGACGAATTATACTGCGAATGCGCTCGACCAGATTGTA
CCTGAACTTATCAAAAATAATATATTTATTGTCAGCGGCCTTGCAAAAGGTGCGGATAATTATGCACATCTTGCGTGTAA
CTTCTATGGTGGCCATACGATTGGAGTACTTGCATATGGTCATGATTTTGTTTATCCGGCTGAAACTGCGCTCATTAGAA
AATTGATGGAAAAAAATCATATCGTTATAAGTGAATATCCACCATCGACACCGATTCAGAAGTTTAGATTTCCGGAACGT
AATAGAATTATCAGTGGTCTTGCTCAAGGGGTCCTGATTACAGAAGCGAAAGAGAGAAGCGGGAGTCTCATTACGCTTGA
TCAGGGACTAGAACAAGACAGAAATATCTATTGCCTACCTGGACCTATCAATCATGAACTGTCATCCGGATGTAACAAAA
GAATAAAAGAAGGTGCAAAGTTAGTGCAATGCGCACAAGACATCCTGGAAGATTATTCTTTTCCTGATATTTCAAAAAAT
TAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (17-223)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus MW2	50.87	95.833	0.488
dprA	Staphylococcus aureus N315	50.87	95.833	0.488
dprA/cilB/dalA	Streptococcus mitis SK321	44.091	91.667	0.404
dprA	Streptococcus mutans UA159	41.026	97.5	0.4
dprA	Lactococcus lactis subsp. cremoris KW2	44.444	90	0.4
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus pneumoniae D39	44.66	85.833	0.383
dprA/cilB/dalA	Streptococcus pneumoniae R6	44.66	85.833	0.383
dprA	Legionella pneumophila strain ERS1305867	43.128	87.917	0.379
dprA	Glaesserella parasuis strain SC1401	39.738	95.417	0.379
dprA	Bacillus subtilis subsp. subtilis str. 168	40.909	91.667	0.375
dprA	Haemophilus influenzae Rd KW20	42.029	86.25	0.363
dprA	Acinetobacter baumannii D1279779	35.802	100	0.362