Detailed information NTG0225024

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: B7P03_RS00880
• Genome accession: NZ_CP020618
• Coordinates: 181040..181351 (+)
• Length: 103 a.a.
• NCBI ID: WP_087436199.1
• Uniprot ID: -
• Organism: Staphylococcus hominis subsp. hominis strain K1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 176040..186351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7P03_RS00850 (B7P03_00840)	-	176823..177026 (+)	204	WP_037555982.1	YqgQ family protein	-
B7P03_RS00855 (B7P03_00845)	-	177023..178009 (+)	987	WP_002449785.1	ROK family glucokinase	-
B7P03_RS00860 (B7P03_00850)	-	178009..178332 (+)	324	WP_087436198.1	MTH1187 family thiamine-binding protein	-
B7P03_RS00865 (B7P03_00855)	-	178334..178960 (+)	627	WP_002449717.1	MBL fold metallo-hydrolase	-
B7P03_RS00870 (B7P03_00860)	comGA	179011..179985 (+)	975	WP_002449861.1	competence type IV pilus ATPase ComGA	Machinery gene
B7P03_RS00875 (B7P03_00865)	comGB	179957..181021 (+)	1065	WP_370597075.1	competence type IV pilus assembly protein ComGB	-
B7P03_RS00880 (B7P03_00870)	comGC	181040..181351 (+)	312	WP_087436199.1	competence type IV pilus major pilin ComGC	Machinery gene
B7P03_RS00885 (B7P03_00875)	comGD	181341..181775 (+)	435	WP_002449773.1	competence type IV pilus minor pilin ComGD	-
B7P03_RS00890 (B7P03_00880)	-	181967..182464 (+)	498	WP_087436200.1	competence protein ComG	-
B7P03_RS00900 (B7P03_00890)	-	182629..183138 (+)	510	WP_002449809.1	shikimate kinase	-
B7P03_RS00905 (B7P03_00895)	gcvT	183331..184422 (+)	1092	WP_087436201.1	glycine cleavage system aminomethyltransferase GcvT	-
B7P03_RS00910 (B7P03_00900)	gcvPA	184439..185791 (+)	1353	WP_087436202.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11420.65 Da
• Isoelectric Point: 9.9944

>NTDB_id=225024 B7P03_RS00880 WP_087436199.1 181040..181351(+) (comGC) [Staphylococcus hominis subsp. hominis strain K1]
MKKFKHKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMAHIQSTGCKAQVKMVNSQIEAYTLKHNRVPNSIEDLITEGFI
KQGQSSCKSGETISIKNGEAVAE

Nucleotide

• Length: 312 bp

>NTDB_id=225024 B7P03_RS00880 WP_087436199.1 181040..181351(+) (comGC) [Staphylococcus hominis subsp. hominis strain K1]
ATGAAAAAATTCAAACATAAATTAAAAGCTTTTACTTTAATCGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCAAACATAGCTAAACAAATGGCACATATTCAATCAACAGGATGTAAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAATAACTGAAGGATTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	81.373	99.029	0.806
comGC	Staphylococcus aureus MW2	81.373	99.029	0.806
comGC/cglC	Streptococcus mitis SK321	46.875	93.204	0.437
comGC/cglC	Streptococcus pneumoniae R6	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae TIGR4	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae Rx1	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae D39	45.833	93.204	0.427
comYC	Streptococcus mutans UA159	47.191	86.408	0.408
comYC	Streptococcus mutans UA140	47.191	86.408	0.408
comGC	Bacillus subtilis subsp. subtilis str. 168	43.158	92.233	0.398
comYC	Streptococcus gordonii str. Challis substr. CH1	46.591	85.437	0.398
comYC	Streptococcus suis isolate S10	46.512	83.495	0.388
comGC/cglC	Streptococcus mitis NCTC 12261	48.193	80.583	0.388
comGC	Lactococcus lactis subsp. cremoris KW2	48.718	75.728	0.369