Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | B7P03_RS00870 | Genome accession | NZ_CP020618 |
| Coordinates | 179011..179985 (+) | Length | 324 a.a. |
| NCBI ID | WP_002449861.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis subsp. hominis strain K1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 174011..184985
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7P03_RS00835 (B7P03_00825) | rpmG | 174472..174621 (+) | 150 | WP_002449881.1 | 50S ribosomal protein L33 | - |
| B7P03_RS00840 (B7P03_00830) | - | 174831..175382 (+) | 552 | WP_101750661.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| B7P03_RS00845 (B7P03_00835) | - | 175382..176839 (+) | 1458 | WP_002449916.1 | rhomboid family protein | - |
| B7P03_RS00850 (B7P03_00840) | - | 176823..177026 (+) | 204 | WP_037555982.1 | YqgQ family protein | - |
| B7P03_RS00855 (B7P03_00845) | - | 177023..178009 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| B7P03_RS00860 (B7P03_00850) | - | 178009..178332 (+) | 324 | WP_087436198.1 | MTH1187 family thiamine-binding protein | - |
| B7P03_RS00865 (B7P03_00855) | - | 178334..178960 (+) | 627 | WP_002449717.1 | MBL fold metallo-hydrolase | - |
| B7P03_RS00870 (B7P03_00860) | comGA | 179011..179985 (+) | 975 | WP_002449861.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| B7P03_RS00875 (B7P03_00865) | comGB | 179957..181021 (+) | 1065 | WP_370597075.1 | competence type IV pilus assembly protein ComGB | - |
| B7P03_RS00880 (B7P03_00870) | comGC | 181040..181351 (+) | 312 | WP_087436199.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| B7P03_RS00885 (B7P03_00875) | comGD | 181341..181775 (+) | 435 | WP_002449773.1 | competence type IV pilus minor pilin ComGD | - |
| B7P03_RS00890 (B7P03_00880) | - | 181967..182464 (+) | 498 | WP_087436200.1 | competence protein ComG | - |
| B7P03_RS00900 (B7P03_00890) | - | 182629..183138 (+) | 510 | WP_002449809.1 | shikimate kinase | - |
| B7P03_RS00905 (B7P03_00895) | gcvT | 183331..184422 (+) | 1092 | WP_087436201.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36955.92 Da Isoelectric Point: 8.2269
>NTDB_id=225023 B7P03_RS00870 WP_002449861.1 179011..179985(+) (comGA) [Staphylococcus hominis subsp. hominis strain K1]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=225023 B7P03_RS00870 WP_002449861.1 179011..179985(+) (comGA) [Staphylococcus hominis subsp. hominis strain K1]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCCGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGCTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCCGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGCTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.753 |
100 |
0.698 |
| comGA | Staphylococcus aureus N315 |
69.753 |
100 |
0.698 |