Detailed information NTG0216329

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: BWR56_RS06750
• Genome accession: NZ_CP019562
• Coordinates: 1394343..1394813 (-)
• Length: 156 a.a.
• NCBI ID: WP_000609595.1
• Uniprot ID: A0A125YWP2
• Organism: Streptococcus oralis strain S.MIT/ORALIS-351
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1389343..1399813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BWR56_RS06725 (BWR56_1334)	-	1389479..1390789 (-)	1311	WP_000625493.1	glycosyltransferase family 2 protein	-
BWR56_RS06730 (BWR56_1335)	-	1390932..1391711 (-)	780	WP_076984702.1	hypothetical protein	-
BWR56_RS06735 (BWR56_1336)	wecB	1391718..1392866 (-)	1149	WP_076984703.1	non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase	-
BWR56_RS06740 (BWR56_1337)	-	1393303..1393812 (-)	510	WP_049505312.1	GNAT family N-acetyltransferase	-
BWR56_RS06745 (BWR56_1338)	rpsR	1394072..1394311 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
BWR56_RS06750 (BWR56_1339)	ssbA	1394343..1394813 (-)	471	WP_000609595.1	single-stranded DNA-binding protein SsbA	Machinery gene
BWR56_RS06755 (BWR56_1340)	rpsF	1394825..1395115 (-)	291	WP_049505311.1	30S ribosomal protein S6	-
BWR56_RS06760 (BWR56_1341)	asnS	1395264..1396607 (-)	1344	WP_049505310.1	asparagine--tRNA ligase	-
BWR56_RS06765 (BWR56_1342)	-	1396760..1397938 (-)	1179	WP_076984704.1	pyridoxal phosphate-dependent aminotransferase	-
BWR56_RS06770 (BWR56_1343)	-	1397948..1398424 (-)	477	WP_076984705.1	DUF5590 domain-containing protein	-
BWR56_RS06775 (BWR56_1344)	-	1398543..1398989 (+)	447	WP_081390680.1	MarR family winged helix-turn-helix transcriptional regulator	-
BWR56_RS06780 (BWR56_1345)	-	1399081..1399629 (+)	549	WP_076984706.1	NADPH-dependent FMN reductase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17182.08 Da
• Isoelectric Point: 5.2065

>NTDB_id=216329 BWR56_RS06750 WP_000609595.1 1394343..1394813(-) (ssbA) [Streptococcus oralis strain S.MIT/ORALIS-351]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHSGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=216329 BWR56_RS06750 WP_000609595.1 1394343..1394813(-) (ssbA) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTACGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAGAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGTGAAGGACATTCAGGTGGAGCTTATTCTGCACCAACTGCTGGCCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTTGGAGCAACCAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A125YWP2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.233	100	0.609
ssb	Latilactobacillus sakei subsp. sakei 23K	52.841	100	0.596
ssb	Neisseria gonorrhoeae MS11	34.286	100	0.385
ssbB/cilA	Streptococcus pneumoniae TIGR4	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae R6	49.573	75	0.372
ssbB/cilA	Streptococcus mitis SK321	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae D39	49.573	75	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	49.573	75	0.372
ssb	Neisseria meningitidis MC58	33.143	100	0.372
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.717	67.949	0.372