Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | BVD88_RS11680 | Genome accession | NZ_CP018907 |
| Coordinates | 1969916..1970362 (+) | Length | 148 a.a. |
| NCBI ID | WP_002220239.1 | Uniprot ID | A0A0Y6S569 |
| Organism | Neisseria meningitidis strain M21273 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1964916..1975362
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVD88_RS11645 (BVD88_12185) | - | 1966042..1966893 (-) | 852 | WP_002221624.1 | RNA polymerase factor sigma-54 | - |
| BVD88_RS11650 (BVD88_12190) | katA | 1967242..1968756 (+) | 1515 | WP_002221625.1 | catalase KatA | - |
| BVD88_RS14180 | - | 1968832..1968954 (+) | 123 | WP_256864604.1 | hypothetical protein | - |
| BVD88_RS13495 | - | 1969055..1969228 (-) | 174 | WP_158666109.1 | hypothetical protein | - |
| BVD88_RS14185 | - | 1969376..1969504 (-) | 129 | WP_256864603.1 | hypothetical protein | - |
| BVD88_RS11680 (BVD88_12220) | pilE | 1969916..1970362 (+) | 447 | WP_002220239.1 | pilin | Machinery gene |
| BVD88_RS11690 (BVD88_12225) | - | 1970816..1971316 (+) | 501 | WP_002220237.1 | REP-associated tyrosine transposase | - |
| BVD88_RS11695 (BVD88_12230) | - | 1971780..1972346 (+) | 567 | WP_002220235.1 | manganese efflux pump MntP family protein | - |
| BVD88_RS11705 (BVD88_12235) | - | 1972780..1974816 (-) | 2037 | WP_002220233.1 | M3 family metallopeptidase | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15648.94 Da Isoelectric Point: 9.3582
>NTDB_id=211682 BVD88_RS11680 WP_002220239.1 1969916..1970362(+) (pilE) [Neisseria meningitidis strain M21273]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
Nucleotide
Download Length: 447 bp
>NTDB_id=211682 BVD88_RS11680 WP_002220239.1 1969916..1970362(+) (pilE) [Neisseria meningitidis strain M21273]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
58.788 |
100 |
0.655 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
56.173 |
100 |
0.615 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.766 |
100 |
0.459 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.596 |
100 |
0.446 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.026 |
100 |
0.432 |
| comP | Acinetobacter baylyi ADP1 |
42.384 |
100 |
0.432 |
| pilA2 | Legionella pneumophila str. Paris |
42.657 |
96.622 |
0.412 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.259 |
96.622 |
0.399 |
| pilA | Pseudomonas aeruginosa PAK |
37.255 |
100 |
0.385 |
| pilA | Vibrio campbellii strain DS40M4 |
38.255 |
100 |
0.385 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.986 |
98.649 |
0.365 |