Detailed information
Bioinformatically predicted
Overview
| Name | comYC | Type | Machinery gene |
| Locus tag | BSR14_RS09545 | Genome accession | NZ_CP018186 |
| Coordinates | 2053747..2054061 (-) | Length | 104 a.a. |
| NCBI ID | WP_037611125.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain ICDC1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2048747..2059061
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSR14_RS09505 (BSR14_09610) | - | 2049011..2049667 (-) | 657 | WP_014632546.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BSR14_RS09510 (BSR14_09615) | - | 2049679..2049876 (-) | 198 | WP_002885716.1 | helix-turn-helix transcriptional regulator | - |
| BSR14_RS09515 (BSR14_09620) | - | 2050127..2051320 (-) | 1194 | WP_002885831.1 | acetate kinase | - |
| BSR14_RS09520 (BSR14_09625) | comYH | 2051377..2052333 (-) | 957 | WP_014632544.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BSR14_RS09525 (BSR14_09630) | comGG | 2052378..2052695 (-) | 318 | WP_045001363.1 | competence type IV pilus minor pilin ComGG | - |
| BSR14_RS09530 (BSR14_09635) | comYF | 2052673..2053110 (-) | 438 | WP_014632542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BSR14_RS09535 (BSR14_09640) | comGE | 2053097..2053327 (-) | 231 | WP_013991265.1 | competence type IV pilus minor pilin ComGE | - |
| BSR14_RS09540 (BSR14_09645) | comYD | 2053359..2053787 (-) | 429 | WP_269434102.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BSR14_RS09545 (BSR14_09650) | comYC | 2053747..2054061 (-) | 315 | WP_037611125.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BSR14_RS09550 (BSR14_09655) | comYB | 2054070..2055170 (-) | 1101 | WP_156209968.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BSR14_RS09555 (BSR14_09660) | comYA | 2055052..2055993 (-) | 942 | WP_045771803.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BSR14_RS09560 (BSR14_09665) | - | 2056073..2056435 (-) | 363 | WP_002887019.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11428.31 Da Isoelectric Point: 9.7150
>NTDB_id=206813 BSR14_RS09545 WP_037611125.1 2053747..2054061(-) (comYC) [Streptococcus salivarius strain ICDC1]
MKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVSEGQI
TQKQADSYNDYYAKHGGESRSVAN
MKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVSEGQI
TQKQADSYNDYYAKHGGESRSVAN
Nucleotide
Download Length: 315 bp
>NTDB_id=206813 BSR14_RS09545 WP_037611125.1 2053747..2054061(-) (comYC) [Streptococcus salivarius strain ICDC1]
TTGAAAAAATTGAATGCCGTTAAATTACGTGCTTTTACGTTGATTGAAATGCTGGTCGTGCTTCTCATTATCAGTATTCT
CCTTTTGCTCTTTGTACCTAACTTGAGCAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCGGCTGTGGTCAAGGTCG
TGGATTCTCAAGCAGAACTTTATGAAATGAAGAATAATAAGACAGCTAGCTTAGCTGCTCTTGTTTCAGAAGGTCAAATC
ACGCAAAAACAGGCAGATTCATACAATGATTATTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAG
TTGAAAAAATTGAATGCCGTTAAATTACGTGCTTTTACGTTGATTGAAATGCTGGTCGTGCTTCTCATTATCAGTATTCT
CCTTTTGCTCTTTGTACCTAACTTGAGCAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCGGCTGTGGTCAAGGTCG
TGGATTCTCAAGCAGAACTTTATGAAATGAAGAATAATAAGACAGCTAGCTTAGCTGCTCTTGTTTCAGAAGGTCAAATC
ACGCAAAAACAGGCAGATTCATACAATGATTATTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYC | Streptococcus mutans UA140 |
70.192 |
100 |
0.702 |
| comYC | Streptococcus mutans UA159 |
70.192 |
100 |
0.702 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
64.762 |
100 |
0.654 |
| comGC/cglC | Streptococcus mitis SK321 |
63.636 |
95.192 |
0.606 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
59.406 |
97.115 |
0.577 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
58.416 |
97.115 |
0.567 |
| comGC/cglC | Streptococcus pneumoniae R6 |
59.596 |
95.192 |
0.567 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
59.596 |
95.192 |
0.567 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
59.596 |
95.192 |
0.567 |
| comGC/cglC | Streptococcus pneumoniae D39 |
59.596 |
95.192 |
0.567 |
| comYC | Streptococcus suis isolate S10 |
61.364 |
84.615 |
0.519 |
| comGC | Staphylococcus aureus MW2 |
50 |
75 |
0.375 |
| comGC | Staphylococcus aureus N315 |
50 |
75 |
0.375 |