Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | Spy49_0092 | Genome accession | CP000829 |
| Coordinates | 104182..104508 (+) | Length | 108 a.a. |
| NCBI ID | ACI60445.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes NZ131 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99182..109508
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Spy49_0089 | - | 101814..102179 (+) | 366 | ACI60442.1 | Putative DNA binding protein | - |
| Spy49_0090 | comYA | 102272..103210 (+) | 939 | ACI60443.1 | Putative ABC transporter subunit ComYA | Machinery gene |
| Spy49_0091 | comYB | 103305..104180 (+) | 876 | ACI60444.1 | Putative competence protein, ABC transporter subunit | Machinery gene |
| Spy49_0092 | comGC | 104182..104508 (+) | 327 | ACI60445.1 | Putative competence protein | Machinery gene |
| Spy49_0093 | - | 104483..104911 (+) | 429 | ACI60446.1 | Competence protein | - |
| Spy49_0094 | - | 104868..105152 (+) | 285 | ACI60447.1 | hypothetical protein | - |
| Spy49_0095 | comYD | 105145..105579 (+) | 435 | ACI60448.1 | Putative competence protein | - |
| Spy49_0096 | - | 105599..105889 (+) | 291 | ACI60449.1 | hypothetical protein | - |
| Spy49_0097 | comYH | 105987..106940 (+) | 954 | ACI60450.1 | Adenine-specific methyltransferase | Machinery gene |
| Spy49_0098 | ackA | 106999..108195 (+) | 1197 | ACI60451.1 | Acetate kinase | - |
| Spy49_0099 | - | 108381..108623 (+) | 243 | ACI60452.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12377.35 Da Isoelectric Point: 9.6760
>NTDB_id=20124 Spy49_0092 ACI60445.1 104182..104508(+) (comGC) [Streptococcus pyogenes NZ131]
MINQWNNLRHKKLKGFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSELKA
DGSITEKQEKAYQDYYDKHKNEKARLSN
MINQWNNLRHKKLKGFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSELKA
DGSITEKQEKAYQDYYDKHKNEKARLSN
Nucleotide
Download Length: 327 bp
>NTDB_id=20124 Spy49_0092 ACI60445.1 104182..104508(+) (comGC) [Streptococcus pyogenes NZ131]
ATGATTAATCAATGGAACAACTTACGACACAAGAAGCTAAAAGGATTTACTCTTCTAGAAATGTTATTGGTGATTCTTGT
CATCAGTGTTTTGATGCTATTATTTGTGCCTAATTTAAGCAAGCAAAAAGACAGGGTTACAGAAACAGGTAATGCCGCTG
TTGTTAAATTAGTGGAGAATCAAGCAGAACTATATGAATTATCTCAAGGCTCAAAACCAAGTTTGAGCGAGTTAAAGGCA
GATGGTAGTATCACTGAGAAACAAGAAAAAGCTTATCAAGACTATTATGACAAACATAAAAATGAAAAAGCCCGTCTTAG
CAATTAA
ATGATTAATCAATGGAACAACTTACGACACAAGAAGCTAAAAGGATTTACTCTTCTAGAAATGTTATTGGTGATTCTTGT
CATCAGTGTTTTGATGCTATTATTTGTGCCTAATTTAAGCAAGCAAAAAGACAGGGTTACAGAAACAGGTAATGCCGCTG
TTGTTAAATTAGTGGAGAATCAAGCAGAACTATATGAATTATCTCAAGGCTCAAAACCAAGTTTGAGCGAGTTAAAGGCA
GATGGTAGTATCACTGAGAAACAAGAAAAAGCTTATCAAGACTATTATGACAAACATAAAAATGAAAAAGCCCGTCTTAG
CAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Lactococcus lactis subsp. cremoris KW2 |
57.843 |
94.444 |
0.546 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
56.19 |
97.222 |
0.546 |
| comGC/cglC | Streptococcus mitis SK321 |
61.957 |
85.185 |
0.528 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
60.87 |
85.185 |
0.519 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
60.87 |
85.185 |
0.519 |
| comGC/cglC | Streptococcus pneumoniae D39 |
60.87 |
85.185 |
0.519 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
60.87 |
85.185 |
0.519 |
| comGC/cglC | Streptococcus pneumoniae R6 |
60.87 |
85.185 |
0.519 |
| comYC | Streptococcus mutans UA159 |
55.208 |
88.889 |
0.491 |
| comYC | Streptococcus mutans UA140 |
55.208 |
88.889 |
0.491 |
| comYC | Streptococcus suis isolate S10 |
59.259 |
75 |
0.444 |