Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LLJM4_RS03325 | Genome accession | NZ_CP015909 |
| Coordinates | 661606..662052 (+) | Length | 148 a.a. |
| NCBI ID | WP_228763864.1 | Uniprot ID | - |
| Organism | Lactococcus cremoris strain JM4 | ||
| Function | dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 656606..667052
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLJM4_RS03305 (LLJM4_1756) | - | 657870..658454 (+) | 585 | WP_134047437.1 | GNAT family N-acetyltransferase | - |
| LLJM4_RS03310 (LLJM4_1755) | - | 658546..658944 (+) | 399 | WP_011676775.1 | hypothetical protein | - |
| LLJM4_RS03315 (LLJM4_1754) | - | 659050..659982 (+) | 933 | WP_014572202.1 | ABC transporter ATP-binding protein | - |
| LLJM4_RS03320 (LLJM4_1753) | - | 659979..661340 (+) | 1362 | WP_081196831.1 | ABC transporter permease | - |
| LLJM4_RS03325 (LLJM4_1752) | comEA | 661606..662052 (+) | 447 | WP_228763864.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| LLJM4_RS03330 (LLJM4_1751) | comEC | 662180..663451 (+) | 1272 | WP_328591192.1 | ComEC/Rec2 family competence protein | Machinery gene |
| LLJM4_RS03335 (LLJM4_02900) | comEC | 663448..663957 (+) | 510 | WP_021165649.1 | MBL fold metallo-hydrolase | Machinery gene |
| LLJM4_RS03340 (LLJM4_1750) | - | 664034..664924 (+) | 891 | WP_311095681.1 | IS982-like element IS982B family transposase | - |
| LLJM4_RS03345 (LLJM4_1749) | - | 664945..665250 (+) | 306 | Protein_652 | ComEC/Rec2 family competence protein | - |
| LLJM4_RS03350 (LLJM4_1748) | - | 665534..666310 (+) | 777 | WP_134047436.1 | alpha/beta hydrolase family protein | - |
| LLJM4_RS03355 (LLJM4_1747) | - | 666493..666708 (+) | 216 | WP_014572212.1 | F0F1 ATP synthase subunit C | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 16038.01 Da Isoelectric Point: 4.6909
>NTDB_id=183404 LLJM4_RS03325 WP_228763864.1 661606..662052(+) (comEA) [Lactococcus cremoris strain JM4]
MVDLKGAVAKPNVYQISSDERLVDLIRQAGGFTDQADQKSINLSAKLKDEEVIYVPKLGESSSSESTDSPISSSVSNQVS
TTSGPKININKADLTELQKLTGIGQKKAQDIIDFRMKNGDFKSIEDLGKVSGFGDKTLEKLKDEISID
MVDLKGAVAKPNVYQISSDERLVDLIRQAGGFTDQADQKSINLSAKLKDEEVIYVPKLGESSSSESTDSPISSSVSNQVS
TTSGPKININKADLTELQKLTGIGQKKAQDIIDFRMKNGDFKSIEDLGKVSGFGDKTLEKLKDEISID
Nucleotide
Download Length: 447 bp
>NTDB_id=183404 LLJM4_RS03325 WP_228763864.1 661606..662052(+) (comEA) [Lactococcus cremoris strain JM4]
ATGGTTGATTTGAAAGGAGCGGTTGCAAAACCTAATGTATACCAAATTTCGTCAGATGAGCGCCTTGTTGATTTAATTAG
GCAAGCGGGAGGATTTACTGACCAAGCAGACCAAAAATCAATCAATCTGTCAGCGAAACTTAAAGATGAAGAAGTGATTT
ATGTACCAAAACTTGGGGAAAGTTCAAGTTCAGAAAGTACTGACAGTCCTATTAGCAGCTCTGTCAGTAATCAAGTTTCA
ACGACAAGTGGTCCAAAAATAAATATCAATAAAGCAGACCTGACAGAATTACAAAAACTGACTGGAATTGGTCAAAAAAA
AGCGCAAGATATTATTGATTTTCGCATGAAAAATGGTGACTTTAAATCAATAGAGGATTTGGGTAAAGTATCTGGCTTTG
GGGATAAAACATTAGAAAAATTGAAAGATGAGATTTCTATTGATTAA
ATGGTTGATTTGAAAGGAGCGGTTGCAAAACCTAATGTATACCAAATTTCGTCAGATGAGCGCCTTGTTGATTTAATTAG
GCAAGCGGGAGGATTTACTGACCAAGCAGACCAAAAATCAATCAATCTGTCAGCGAAACTTAAAGATGAAGAAGTGATTT
ATGTACCAAAACTTGGGGAAAGTTCAAGTTCAGAAAGTACTGACAGTCCTATTAGCAGCTCTGTCAGTAATCAAGTTTCA
ACGACAAGTGGTCCAAAAATAAATATCAATAAAGCAGACCTGACAGAATTACAAAAACTGACTGGAATTGGTCAAAAAAA
AGCGCAAGATATTATTGATTTTCGCATGAAAAATGGTGACTTTAAATCAATAGAGGATTTGGGTAAAGTATCTGGCTTTG
GGGATAAAACATTAGAAAAATTGAAAGATGAGATTTCTATTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Lactococcus lactis subsp. cremoris KW2 |
96.622 |
100 |
0.966 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
51.02 |
99.324 |
0.507 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
44.512 |
100 |
0.493 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
48.98 |
99.324 |
0.486 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
48.299 |
99.324 |
0.48 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
48.299 |
99.324 |
0.48 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
48.299 |
99.324 |
0.48 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
47.619 |
99.324 |
0.473 |
| comEA | Streptococcus thermophilus LMD-9 |
43.421 |
100 |
0.446 |
| comEA | Staphylococcus aureus N315 |
41.781 |
98.649 |
0.412 |
| comEA | Staphylococcus aureus MW2 |
41.781 |
98.649 |
0.412 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
40.816 |
99.324 |
0.405 |