Detailed information NTG0183405

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LLJM4_RS03330
• Genome accession: NZ_CP015909
• Coordinates: 662180..663451 (+)
• Length: 423 a.a.
• NCBI ID: WP_328591192.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain JM4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 657180..668451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJM4_RS03305 (LLJM4_1756)	-	657870..658454 (+)	585	WP_134047437.1	GNAT family N-acetyltransferase	-
LLJM4_RS03310 (LLJM4_1755)	-	658546..658944 (+)	399	WP_011676775.1	hypothetical protein	-
LLJM4_RS03315 (LLJM4_1754)	-	659050..659982 (+)	933	WP_014572202.1	ABC transporter ATP-binding protein	-
LLJM4_RS03320 (LLJM4_1753)	-	659979..661340 (+)	1362	WP_081196831.1	ABC transporter permease	-
LLJM4_RS03325 (LLJM4_1752)	comEA	661606..662052 (+)	447	WP_228763864.1	helix-hairpin-helix domain-containing protein	Machinery gene
LLJM4_RS03330 (LLJM4_1751)	comEC	662180..663451 (+)	1272	WP_328591192.1	ComEC/Rec2 family competence protein	Machinery gene
LLJM4_RS03335 (LLJM4_02900)	comEC	663448..663957 (+)	510	WP_021165649.1	MBL fold metallo-hydrolase	Machinery gene
LLJM4_RS03340 (LLJM4_1750)	-	664034..664924 (+)	891	WP_311095681.1	IS982-like element IS982B family transposase	-
LLJM4_RS03345 (LLJM4_1749)	-	664945..665250 (+)	306	Protein_652	ComEC/Rec2 family competence protein	-
LLJM4_RS03350 (LLJM4_1748)	-	665534..666310 (+)	777	WP_134047436.1	alpha/beta hydrolase family protein	-
LLJM4_RS03355 (LLJM4_1747)	-	666493..666708 (+)	216	WP_014572212.1	F0F1 ATP synthase subunit C	-
LLJM4_RS03360 (LLJM4_1746)	atpB	666755..667468 (+)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
LLJM4_RS03365 (LLJM4_1745)	atpF	667483..667989 (+)	507	WP_134047435.1	F0F1 ATP synthase subunit B	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 49018.13 Da
• Isoelectric Point: 9.7194

>NTDB_id=183405 LLJM4_RS03330 WP_328591192.1 662180..663451(+) (comEC) [Lactococcus cremoris strain JM4]
MIPILIVFAVFFLLINSLSIRDNENQPKNLSKIELIPDTIQVNGDLLSFQGRMNGQKYQVYDTLKSLKEKGFYQNLSQNC
QLSFTGNLEIPETQRNFNGFDDQKYLTSQNIYRQITIQQITNVEIKKNFDLHTLRRKAIVWTQNHFPKPMSDYMTGLLFG
FLSKDFNQMSDIYSSLGIIHLFALSGMQVNFFIDWFRKILLRMGLTRERVNLVQIPFSIFYAFMTGLSVSVLRALFQKNI
RLTSLDNIAVTTLVLMLISPKFLLTTGGQLTLFYAFVISMLNHPFSNLNGLKKVLTESSVLSLCVLPLLIFDFHIFQPIS
ILLTIIFGFLFDFMLLPLLLCCFLISFLGFSLNLNYIFQILEWLVYKVDLPLHYPFVLGKPSSLELIILFVLIGLFVDSF
SHKKRRFFLIGFIFLFFSSLKIQ

Nucleotide

• Length: 1272 bp

>NTDB_id=183405 LLJM4_RS03330 WP_328591192.1 662180..663451(+) (comEC) [Lactococcus cremoris strain JM4]
ATGATTCCGATATTAATTGTTTTTGCTGTATTTTTTCTGTTAATCAATAGTCTTAGTATTAGGGATAATGAAAATCAACC
AAAAAATCTCTCAAAAATTGAATTAATTCCAGATACAATCCAAGTCAATGGTGATTTATTGAGTTTTCAGGGGAGAATGA
ATGGACAAAAATATCAAGTCTATGACACATTGAAAAGTCTAAAAGAGAAAGGGTTTTATCAGAACTTAAGTCAAAATTGT
CAGTTAAGTTTCACAGGAAACCTTGAAATACCAGAAACTCAGCGAAATTTTAATGGTTTTGATGACCAAAAATATTTAAC
TAGTCAAAATATCTATCGACAGATTACCATCCAACAAATTACAAATGTGGAAATAAAAAAGAATTTTGACCTTCATACTT
TAAGGCGAAAGGCAATTGTTTGGACACAAAATCATTTTCCAAAACCGATGAGTGACTATATGACAGGTTTGCTTTTTGGC
TTTTTAAGTAAGGATTTTAATCAGATGAGCGATATTTACAGCTCTTTAGGAATTATTCATCTTTTTGCTCTATCAGGAAT
GCAAGTAAATTTTTTTATTGATTGGTTTCGTAAAATACTTCTTCGCATGGGACTGACGAGAGAAAGAGTGAATCTTGTTC
AAATTCCATTTTCTATTTTTTATGCTTTTATGACGGGATTATCGGTTTCAGTTTTAAGAGCCCTTTTTCAAAAAAATATT
CGTCTGACTTCTTTGGATAATATCGCAGTTACGACATTAGTTTTGATGCTCATAAGTCCAAAATTTTTACTGACGACTGG
TGGTCAGCTTACCTTGTTTTATGCTTTTGTCATTTCGATGCTTAATCATCCTTTTTCTAATTTAAATGGATTGAAAAAAG
TGCTGACAGAATCATCAGTCCTTTCACTTTGTGTTCTTCCGTTACTCATCTTTGATTTCCATATTTTTCAGCCTATTTCA
ATATTATTAACAATTATATTTGGTTTTCTTTTTGATTTTATGTTGCTCCCGCTGCTTTTATGCTGTTTTCTTATATCATT
TTTGGGATTTTCGCTCAATTTAAATTATATTTTTCAAATTCTAGAATGGCTAGTTTATAAAGTTGATTTACCCTTACATT
ACCCCTTTGTTTTGGGGAAACCTAGTTCACTCGAATTAATTATTCTATTTGTGTTAATTGGTTTATTCGTAGATTCATTT
TCTCATAAAAAAAGGAGATTTTTTTTAATTGGATTTATATTTTTATTTTTTTCATCACTAAAAATCCAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (56-122)

• Competence protein (Competence) (157-397)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	96.882	98.582	0.955
comEC/celB	Streptococcus mitis SK321	46.512	91.489	0.426
comEC/celB	Streptococcus mitis NCTC 12261	45.995	91.489	0.421
comEC/celB	Streptococcus pneumoniae TIGR4	45.995	91.489	0.421
comEC/celB	Streptococcus pneumoniae Rx1	45.22	91.489	0.414
comEC/celB	Streptococcus pneumoniae D39	45.22	91.489	0.414
comEC/celB	Streptococcus pneumoniae R6	45.22	91.489	0.414