Detailed information NTG0183046

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: LLJM3_RS11785
• Genome accession: NZ_CP015901
• Coordinates: 2262576..2262926 (-)
• Length: 116 a.a.
• NCBI ID: WP_050574401.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain JM3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2257576..2267926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJM3_RS11745 (LLJM3_2403)	-	2258112..2258921 (-)	810	WP_011677177.1	metal ABC transporter permease	-
LLJM3_RS11750 (LLJM3_2404)	-	2258914..2259651 (-)	738	WP_011677178.1	metal ABC transporter ATP-binding protein	-
LLJM3_RS11755 (LLJM3_2405)	-	2259830..2260672 (-)	843	WP_011677179.1	metal ABC transporter solute-binding protein, Zn/Mn family	-
LLJM3_RS11760 (LLJM3_2406)	-	2260669..2261106 (-)	438	WP_011677180.1	zinc-dependent MarR family transcriptional regulator	-
LLJM3_RS11765 (LLJM3_03405)	comGG	2261186..2261485 (-)	300	WP_011677181.1	competence type IV pilus minor pilin ComGG	Machinery gene
LLJM3_RS11770 (LLJM3_2408)	comGF	2261509..2261934 (-)	426	WP_011677182.1	competence type IV pilus minor pilin ComGF	Machinery gene
LLJM3_RS11775 (LLJM3_2409)	comGE	2261918..2262214 (-)	297	WP_011677183.1	competence type IV pilus minor pilin ComGE	Machinery gene
LLJM3_RS11780 (LLJM3_2410)	comGD	2262186..2262374 (-)	189	WP_014573336.1	hypothetical protein	Machinery gene
LLJM3_RS11785 (LLJM3_2411)	comGC	2262576..2262926 (-)	351	WP_050574401.1	competence type IV pilus major pilin ComGC	Machinery gene
LLJM3_RS11790 (LLJM3_2412)	comGB	2262971..2263997 (-)	1027	Protein_2295	competence type IV pilus assembly protein ComGB	-
LLJM3_RS11795 (LLJM3_03410)	-	2263897..2264718 (-)	822	Protein_2296	ATPase, T2SS/T4P/T4SS family	-
LLJM3_RS11800 (LLJM3_2414)	-	2264821..2265711 (+)	891	WP_011677100.1	IS982 family transposase	-
LLJM3_RS11805 (LLJM3_03415)	comGA	2265693..2265884 (-)	192	WP_041167484.1	hypothetical protein	Machinery gene

Sequence

Protein

• Length: 116 a.a.
• Molecular weight: 13289.44 Da
• Isoelectric Point: 7.2003

>NTDB_id=183046 LLJM3_RS11785 WP_050574401.1 2262576..2262926(-) (comGC) [Lactococcus cremoris strain JM3]
MSKALSLIKIHGRKLWQKKQKAFTLIEMLIVLAIISILILLFVPNLIKEKAQVQKTGEAAVVKVVESQAQLYELDHDNDK
PNLSELLSAGMITQKQVTAYDDYYDQNKNEQRNFDD

Nucleotide

• Length: 351 bp

>NTDB_id=183046 LLJM3_RS11785 WP_050574401.1 2262576..2262926(-) (comGC) [Lactococcus cremoris strain JM3]
ATGAGCAAAGCTTTGTCATTAATTAAAATTCACGGAAGAAAGCTTTGGCAAAAAAAGCAAAAAGCATTTACCTTGATTGA
GATGTTAATTGTGTTGGCAATTATCAGTATTTTAATTTTGCTTTTTGTGCCAAATTTGATAAAAGAAAAAGCACAAGTTC
AAAAAACTGGTGAAGCAGCAGTAGTTAAAGTAGTTGAAAGTCAGGCACAACTTTATGAGTTGGATCATGATAATGATAAG
CCAAACCTATCAGAACTTTTAAGTGCGGGGATGATTACGCAAAAGCAAGTCACGGCCTATGATGATTACTATGACCAGAA
TAAAAATGAACAGCGCAATTTCGATGATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (18-41)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	98.276	100	0.983
comYC	Streptococcus gordonii str. Challis substr. CH1	58.586	85.345	0.5
comGC/cglC	Streptococcus mitis SK321	55.882	87.931	0.491
comGC/cglC	Streptococcus pneumoniae R6	53.922	87.931	0.474
comGC/cglC	Streptococcus pneumoniae TIGR4	53.922	87.931	0.474
comGC/cglC	Streptococcus pneumoniae Rx1	53.922	87.931	0.474
comGC/cglC	Streptococcus pneumoniae D39	53.922	87.931	0.474
comYC	Streptococcus mutans UA140	59.14	80.172	0.474
comYC	Streptococcus mutans UA159	59.14	80.172	0.474
comGC/cglC	Streptococcus mitis NCTC 12261	55.67	83.621	0.466
comYC	Streptococcus suis isolate S10	56.818	75.862	0.431