Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LLJM1_RS08895 | Genome accession | NZ_CP015899 |
| Coordinates | 1696482..1696952 (-) | Length | 156 a.a. |
| NCBI ID | WP_231099719.1 | Uniprot ID | - |
| Organism | Lactococcus cremoris strain JM1 | ||
| Function | dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1691482..1701952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLJM1_RS08865 (LLJM1_1714) | - | 1691826..1692041 (-) | 216 | WP_014572212.1 | F0F1 ATP synthase subunit C | - |
| LLJM1_RS08870 (LLJM1_1715) | - | 1692224..1693000 (-) | 777 | WP_014572211.1 | alpha/beta hydrolase family protein | - |
| LLJM1_RS08875 (LLJM1_1716) | - | 1693284..1693589 (-) | 306 | Protein_1721 | ComEC/Rec2 family competence protein | - |
| LLJM1_RS08880 (LLJM1_03610) | - | 1693610..1694500 (-) | 891 | WP_015082326.1 | IS982-like element IS982B family transposase | - |
| LLJM1_RS08885 (LLJM1_03615) | comEC | 1694577..1695086 (-) | 510 | WP_021165649.1 | MBL fold metallo-hydrolase | Machinery gene |
| LLJM1_RS08890 (LLJM1_1719) | comEC | 1695083..1696501 (-) | 1419 | WP_228764444.1 | ComEC/Rec2 family competence protein | Machinery gene |
| LLJM1_RS08895 (LLJM1_1720) | comEA | 1696482..1696952 (-) | 471 | WP_231099719.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| LLJM1_RS08900 (LLJM1_1721) | - | 1697195..1698556 (-) | 1362 | WP_081196137.1 | ABC transporter permease | - |
| LLJM1_RS08905 (LLJM1_1722) | - | 1698553..1699485 (-) | 933 | WP_032950468.1 | ABC transporter ATP-binding protein | - |
| LLJM1_RS08910 (LLJM1_1723) | - | 1699591..1699989 (-) | 399 | WP_011676775.1 | hypothetical protein | - |
| LLJM1_RS08915 (LLJM1_1724) | - | 1700106..1700666 (-) | 561 | WP_032950467.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17024.20 Da Isoelectric Point: 5.0572
>NTDB_id=182944 LLJM1_RS08895 WP_231099719.1 1696482..1696952(-) (comEA) [Lactococcus cremoris strain JM1]
MKKNKNEIMVDLKGAVAKPNVYQISSDERLVDLIRQAGGFTDQADQKSINLSAKLKDEEVIYVPKLGESSSSESTDSPIS
SSVSNQVSTTSGPKININKADLTELQKLTGIGQKKAQDIIDFRMKNGDFKSIEDLGKVSGFGDKTLEKLKDEISID
MKKNKNEIMVDLKGAVAKPNVYQISSDERLVDLIRQAGGFTDQADQKSINLSAKLKDEEVIYVPKLGESSSSESTDSPIS
SSVSNQVSTTSGPKININKADLTELQKLTGIGQKKAQDIIDFRMKNGDFKSIEDLGKVSGFGDKTLEKLKDEISID
Nucleotide
Download Length: 471 bp
>NTDB_id=182944 LLJM1_RS08895 WP_231099719.1 1696482..1696952(-) (comEA) [Lactococcus cremoris strain JM1]
GTGAAAAAAAATAAAAACGAAATTATGGTTGATTTGAAAGGAGCGGTTGCAAAACCTAATGTATACCAAATTTCGTCAGA
TGAGCGCCTTGTTGATTTAATTAGGCAAGCGGGAGGATTTACTGACCAAGCAGACCAAAAATCAATCAATCTGTCAGCGA
AACTTAAAGATGAAGAAGTGATTTATGTACCAAAACTTGGGGAAAGTTCAAGTTCAGAAAGTACTGACAGTCCTATTAGC
AGCTCTGTCAGTAATCAAGTTTCAACGACAAGTGGTCCAAAAATAAATATCAATAAAGCAGACCTGACAGAATTACAAAA
ACTGACTGGAATTGGTCAAAAAAAAGCGCAAGATATTATTGATTTTCGCATGAAAAATGGTGACTTTAAATCAATAGAGG
ATTTGGGTAAAGTATCTGGCTTTGGGGATAAAACATTAGAAAAATTGAAAGATGAGATTTCTATTGATTAA
GTGAAAAAAAATAAAAACGAAATTATGGTTGATTTGAAAGGAGCGGTTGCAAAACCTAATGTATACCAAATTTCGTCAGA
TGAGCGCCTTGTTGATTTAATTAGGCAAGCGGGAGGATTTACTGACCAAGCAGACCAAAAATCAATCAATCTGTCAGCGA
AACTTAAAGATGAAGAAGTGATTTATGTACCAAAACTTGGGGAAAGTTCAAGTTCAGAAAGTACTGACAGTCCTATTAGC
AGCTCTGTCAGTAATCAAGTTTCAACGACAAGTGGTCCAAAAATAAATATCAATAAAGCAGACCTGACAGAATTACAAAA
ACTGACTGGAATTGGTCAAAAAAAAGCGCAAGATATTATTGATTTTCGCATGAAAAATGGTGACTTTAAATCAATAGAGG
ATTTGGGTAAAGTATCTGGCTTTGGGGATAAAACATTAGAAAAATTGAAAGATGAGATTTCTATTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Lactococcus lactis subsp. cremoris KW2 |
96.129 |
99.359 |
0.955 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
51.007 |
95.513 |
0.487 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
44.512 |
100 |
0.468 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
48.993 |
95.513 |
0.468 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
48.322 |
95.513 |
0.462 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
48.322 |
95.513 |
0.462 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
48.322 |
95.513 |
0.462 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
47.651 |
95.513 |
0.455 |
| comEA | Streptococcus thermophilus LMD-9 |
42.5 |
100 |
0.436 |
| comEA | Staphylococcus aureus N315 |
41.83 |
98.077 |
0.41 |
| comEA | Staphylococcus aureus MW2 |
41.83 |
98.077 |
0.41 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
41.216 |
94.872 |
0.391 |