Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | A5478_RS09500 | Genome accession | NZ_CP015342 |
| Coordinates | 2120083..2120496 (-) | Length | 137 a.a. |
| NCBI ID | WP_027225147.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain D-7632 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2115083..2125496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5478_RS09490 (A5478_09490) | letS | 2116013..2118745 (+) | 2733 | WP_027225145.1 | two-component system sensor histidine kinase LetS | Regulator |
| A5478_RS09495 (A5478_09495) | - | 2118842..2120086 (+) | 1245 | WP_027225146.1 | 6-phosphofructokinase | - |
| A5478_RS09500 (A5478_09500) | pilA2 | 2120083..2120496 (-) | 414 | WP_027225147.1 | pilin | Machinery gene |
| A5478_RS09505 (A5478_09505) | pilA2 | 2120689..2121099 (-) | 411 | WP_011214168.1 | pilin | Machinery gene |
| A5478_RS09510 (A5478_09510) | - | 2121402..2121719 (+) | 318 | WP_027225148.1 | BolA family protein | - |
| A5478_RS09515 (A5478_09515) | - | 2121794..2123215 (+) | 1422 | WP_027225149.1 | APC family permease | - |
| A5478_RS09520 (A5478_09520) | - | 2123313..2124743 (-) | 1431 | WP_027225150.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14475.82 Da Isoelectric Point: 6.2016
>NTDB_id=178521 A5478_RS09500 WP_027225147.1 2120083..2120496(-) (pilA2) [Legionella pneumophila strain D-7632]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=178521 A5478_RS09500 WP_027225147.1 2120083..2120496(-) (pilA2) [Legionella pneumophila strain D-7632]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTG
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATCACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTG
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATCACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
73.723 |
100 |
0.737 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.993 |
100 |
0.73 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.012 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
46.207 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.184 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |