Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BtBc_RS11950 | Genome accession | NZ_CP015150 |
| Coordinates | 2290396..2290728 (+) | Length | 110 a.a. |
| NCBI ID | WP_001082769.1 | Uniprot ID | A0A9W5QHQ8 |
| Organism | Bacillus thuringiensis strain Bc601 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2285396..2295728
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BtBc_RS11930 (BtBc_11930) | - | 2286629..2286865 (-) | 237 | WP_000021280.1 | helix-turn-helix transcriptional regulator | - |
| BtBc_RS11935 (BtBc_11935) | - | 2287179..2287688 (+) | 510 | WP_001089284.1 | hypothetical protein | - |
| BtBc_RS31850 | - | 2287852..2288582 (-) | 731 | Protein_2314 | transposase | - |
| BtBc_RS11945 (BtBc_11945) | - | 2288964..2290055 (+) | 1092 | WP_001259000.1 | hypothetical protein | - |
| BtBc_RS11950 (BtBc_11950) | ssbA | 2290396..2290728 (+) | 333 | WP_001082769.1 | single-stranded DNA-binding protein | Machinery gene |
| BtBc_RS11955 (BtBc_11955) | - | 2291065..2291625 (-) | 561 | WP_000714949.1 | AAA family ATPase | - |
| BtBc_RS11960 (BtBc_11960) | - | 2292043..2293170 (+) | 1128 | WP_000692580.1 | conserved virulence factor C family protein | - |
| BtBc_RS11965 (BtBc_11965) | - | 2293174..2293557 (+) | 384 | WP_000634884.1 | DCC1-like thiol-disulfide oxidoreductase family protein | - |
| BtBc_RS11970 (BtBc_11970) | - | 2293641..2294075 (+) | 435 | WP_000063706.1 | BrxA/BrxB family bacilliredoxin | - |
| BtBc_RS11975 (BtBc_11975) | - | 2294125..2294901 (+) | 777 | WP_000637451.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 110 a.a. Molecular weight: 12610.39 Da Isoelectric Point: 9.4344
>NTDB_id=177142 BtBc_RS11950 WP_001082769.1 2290396..2290728(+) (ssbA) [Bacillus thuringiensis strain Bc601]
MNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVAEYCKKGSLVGITGRIQTSN
YDDEQGKRIYRTEVVIESITFLERRREGAS
MNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVAEYCKKGSLVGITGRIQTSN
YDDEQGKRIYRTEVVIESITFLERRREGAS
Nucleotide
Download Length: 333 bp
>NTDB_id=177142 BtBc_RS11950 WP_001082769.1 2290396..2290728(+) (ssbA) [Bacillus thuringiensis strain Bc601]
TTGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTCGCTTATGCACG
AATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTTGGC
GCAAATCGGCTGAGAATGTAGCTGAATATTGTAAGAAGGGGTCGCTCGTTGGGATTACAGGGCGTATTCAGACTAGTAAT
TACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCGGGA
GGGGGCATCGTAA
TTGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTCGCTTATGCACG
AATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTTGGC
GCAAATCGGCTGAGAATGTAGCTGAATATTGTAAGAAGGGGTCGCTCGTTGGGATTACAGGGCGTATTCAGACTAGTAAT
TACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCGGGA
GGGGGCATCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.048 |
95.455 |
0.564 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.19 |
95.455 |
0.536 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.351 |
100 |
0.518 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
45.714 |
95.455 |
0.436 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.519 |
98.182 |
0.427 |
| ssbA | Streptococcus mutans UA159 |
40.741 |
98.182 |
0.4 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40.741 |
98.182 |
0.4 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
40.741 |
98.182 |
0.4 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
39.815 |
98.182 |
0.391 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
39.815 |
98.182 |
0.391 |
| ssbB/cilA | Streptococcus mitis SK321 |
39.815 |
98.182 |
0.391 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
39.815 |
98.182 |
0.391 |