Detailed information NTG0172852

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: VVCECT4999_RS02990
• Genome accession: NZ_CP014636
• Coordinates: 594757..595806 (+)
• Length: 349 a.a.
• NCBI ID: WP_039448947.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain CECT 4999
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 589757..600806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVCECT4999_RS02975 (VVCECT4999_02940)	rpoS	590408..591400 (+)	993	WP_017420278.1	RNA polymerase sigma factor RpoS	Regulator
VVCECT4999_RS02980 (VVCECT4999_02945)	mutS	591476..594037 (-)	2562	WP_038941441.1	DNA mismatch repair protein MutS	-
VVCECT4999_RS02985 (VVCECT4999_02950)	pncC	594121..594624 (+)	504	WP_017420280.1	nicotinamide-nucleotide amidase	-
VVCECT4999_RS02990 (VVCECT4999_02955)	recA	594757..595806 (+)	1050	WP_039448947.1	recombinase RecA	Machinery gene
VVCECT4999_RS02995 (VVCECT4999_02960)	recX	595916..596377 (+)	462	WP_038941439.1	recombination regulator RecX	-
VVCECT4999_RS03000 (VVCECT4999_02965)	alaS	596556..599138 (+)	2583	WP_039448945.1	alanine--tRNA ligase	-
VVCECT4999_RS03005 (VVCECT4999_02970)	-	599335..600522 (+)	1188	WP_038941435.1	aspartate kinase	-
VVCECT4999_RS03010 (VVCECT4999_02975)	csrA	600614..600805 (+)	192	WP_011079528.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37724.29 Da
• Isoelectric Point: 4.8857

>NTDB_id=172852 VVCECT4999_RS02990 WP_039448947.1 594757..595806(+) (recA) [Vibrio vulnificus strain CECT 4999]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDQLLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKCKLIEKSGAWYSYNGDKIGQGKANACKYLKENIDVAKVLDT
KLRELLLSSANINDESAELVEEMPEQEEF

Nucleotide

• Length: 1050 bp

>NTDB_id=172852 VVCECT4999_RS02990 WP_039448947.1 594757..595806(+) (recA) [Vibrio vulnificus strain CECT 4999]
ATGGACGAGAACAAACAGAAGGCACTGGCCGCCGCGCTAGGTCAAATTGAAAAGCAGTTCGGTAAAGGTTCAATCATGCG
CCTAGGTGACAACCGTGCGATGGATGTTGAAACCATCTCGACAGGTTCACTATCTCTGGATATTGCGCTGGGTGCTGGTG
GCTTACCAATGGGCCGTATCGTTGAAATTTTTGGTCCAGAATCTTCAGGTAAAACCACGTTGACCCTTGAGCTGATCGCT
GCGGCTCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCTGAGCACGCGTTGGATCCTGTGTATGCGAAGAAACTTGG
CGTAAATATCGACCAATTGTTGGTATCTCAGCCTGATACTGGTGAACAAGCATTGGAAATCTGTGATGCTCTTGCTCGCT
CAGGTGCGGTTGACGTTATTGTTGTCGACTCTGTGGCCGCATTGACACCAAAGGCAGAAATCGAAGGTGAGATGGGCGAT
TCGCACATGGGTCTGCAAGCTCGTATGCTCTCTCAAGCGATGCGTAAGTTAACGGGGAACCTAAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACCACAACAGGTGGTAACGCAC
TGAAATTCTACGCTTCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATCAAAGAAGGCGATGAGGTAGTGGGTAATGAA
ACGCGTATCAAAGTGGTGAAGAATAAGATCGCTGCGCCGTTTAAAGAAGCCAACACTCAAATTATGTACGGCCAGGGCTT
TAACCGTGAAGGCGAACTGATTGACCTAGGCGTGAAATGTAAGCTGATTGAAAAATCAGGTGCTTGGTATAGCTATAACG
GCGACAAAATTGGCCAAGGTAAAGCGAACGCATGTAAGTACCTGAAAGAAAACATAGATGTAGCAAAAGTACTGGATACA
AAATTGCGTGAATTGTTGCTTTCTTCAGCAAACATCAACGATGAATCGGCAGAGTTAGTCGAAGAAATGCCAGAGCAAGA
AGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	95.482	95.129	0.908
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.482	95.129	0.908
recA	Pseudomonas stutzeri DSM 10701	75	95.129	0.713
recA	Glaesserella parasuis strain SC1401	69.492	100	0.705
recA	Acinetobacter baylyi ADP1	70.145	98.854	0.693
recA	Acinetobacter baumannii D1279779	72.948	94.269	0.688
recA	Neisseria gonorrhoeae MS11	69.018	93.41	0.645
recA	Neisseria gonorrhoeae MS11	69.018	93.41	0.645
recA	Neisseria gonorrhoeae strain FA1090	69.018	93.41	0.645
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.112	0.633
recA	Helicobacter pylori strain NCTC11637	59.884	98.567	0.59
recA	Helicobacter pylori 26695	59.593	98.567	0.587
recA	Streptococcus pneumoniae Rx1	58.571	100	0.587
recA	Streptococcus pneumoniae R6	58.571	100	0.587
recA	Streptococcus pneumoniae D39	58.571	100	0.587
recA	Streptococcus pneumoniae TIGR4	58.571	100	0.587
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.241	90.544	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	91.977	0.582
recA	Streptococcus mitis SK321	61.92	92.55	0.573
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	94.842	0.573
recA	Lactococcus lactis subsp. cremoris KW2	61.61	92.55	0.57
recA	Streptococcus mitis NCTC 12261	61.61	92.55	0.57
recA	Latilactobacillus sakei subsp. sakei 23K	61.682	91.977	0.567
recA	Streptococcus pyogenes NZ131	60.615	93.123	0.564
recA	Streptococcus mutans UA159	60.615	93.123	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.258	88.825	0.553