Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   SanJ4211_RS07855 Genome accession   NZ_CP012805
Coordinates   1557348..1559327 (-) Length   659 a.a.
NCBI ID   WP_021002029.1    Uniprot ID   A0AAP6BPV7
Organism   Streptococcus anginosus strain J4211     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1552348..1564327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS07835 (SanJ4211_1549c) amiF 1552539..1553462 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  SanJ4211_RS07840 (SanJ4211_1550c) amiE 1553473..1554540 (-) 1068 WP_021002028.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS07845 (SanJ4211_1551c) amiD 1554549..1555475 (-) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  SanJ4211_RS07850 (SanJ4211_1552c) amiC 1555475..1556971 (-) 1497 WP_003026183.1 ABC transporter permease Regulator
  SanJ4211_RS07855 (SanJ4211_1553c) amiA3 1557348..1559327 (-) 1980 WP_021002029.1 peptide ABC transporter substrate-binding protein Regulator
  SanJ4211_RS07860 (SanJ4211_1554c) amiA3 1559525..1561501 (-) 1977 WP_021002030.1 peptide ABC transporter substrate-binding protein Regulator
  SanJ4211_RS07865 (SanJ4211_1555c) - 1561667..1562350 (-) 684 WP_106079118.1 B3/4 domain-containing protein -
  SanJ4211_RS07870 (SanJ4211_1556c) - 1562584..1564194 (-) 1611 WP_021002032.1 CTP synthase -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73212.80 Da        Isoelectric Point: 7.8685

>NTDB_id=157722 SanJ4211_RS07855 WP_021002029.1 1557348..1559327(-) (amiA3) [Streptococcus anginosus strain J4211]
MKKSKIITLAALALLATGALAACSSSKTSSGNKTFSYIYEQDPDNLNYLTTGKAATANLTSNVIDGLLENDRYGNLVPSV
AKDWTVSKDGLTYTYTLRKGAKWYTSEGEEYAEVKAQDFVTGLKYAADNKSDAIYLVQDSVKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKNNIVYTPQDATTYLVATNIDRQSYNHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKILRNLFVPPTFVQTDDKSFGELVKEKLVGYNESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGENTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETTN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFTNPFAWSGNKGNSEIILYKYLELQDEPVTQNQYKKAMEKWN
KKRTESNKKAQEELADHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=157722 SanJ4211_RS07855 WP_021002029.1 1557348..1559327(-) (amiA3) [Streptococcus anginosus strain J4211]
ATGAAGAAAAGTAAAATCATTACCCTTGCAGCGCTAGCCTTGCTTGCAACAGGAGCTCTAGCAGCTTGTTCTAGCTCTAA
AACAAGCTCGGGGAACAAAACATTCTCATATATTTATGAGCAAGATCCAGATAACCTGAACTATTTGACAACTGGGAAAG
CAGCTACTGCAAATCTTACCAGTAATGTCATTGACGGACTCTTGGAAAATGACCGTTACGGAAATCTAGTTCCTTCTGTA
GCGAAGGATTGGACAGTCTCCAAGGATGGCTTGACTTATACTTATACACTTCGTAAGGGTGCCAAATGGTACACATCAGA
GGGCGAAGAGTATGCAGAAGTTAAGGCACAAGACTTTGTGACAGGCTTAAAATATGCTGCGGATAATAAATCTGATGCTA
TTTACTTGGTGCAAGATTCTGTTAAAGGCTTGGATGCTTACATGAAGGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTTGATGATTACACGGTTCAATACACGCTTAATCGACCAGAAAGCTTTTGGAATTCTAAAACAACAATGGGCGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGACCCATCTAGTCTTCTTT
ATAATGGTCCATACTTGCTGAAATCTATCACAGCGAAATCGTCTGTTGAATTTGCTAAAAATCCAAACTACTGGGATAAG
AAGAATGTGCACATTGACAACATCAAGTTGTCCTACTATGATGGTCAAGACCAAGACAAACTTGCTAAAGGATTTAGTGA
TGGCTCATTTACCAATGCTAAAGTATTTCCAACTAGCCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAAACAACATCG
TTTATACTCCACAAGATGCAACGACTTACTTAGTAGCTACAAATATTGATCGTCAATCTTACAATCACACTTCAAAGACA
ACAGATGCTCAAAAAACTTCTACTAAGAAAGCTTTGCTAAACAAGGATTTCCGTCAAGCGATTACCTTTGCATTTGACCG
CACTGCTTATGCATCACAGGTGAATGGTAAAGACGGTGCGACGAAGATACTCCGTAATCTTTTTGTACCGCCAACGTTTG
TTCAAACAGATGACAAAAGCTTTGGAGAATTAGTCAAAGAAAAATTAGTTGGTTATAATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGATGGTCTTTACAATCCAACTAAAGCTAAAGAAAAATTAGCGAAAGCGAAAGCAGCGCTTCAAGC
AGACGGCGTTCAATTCCCAATCCACATTGATATGCCAGTTGACCAAACAGCGACTAATAAAGTTCAACGTGTGCAATCAT
TGAAACAATCTATTGAAAAAAATCTTGGTAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGACGTGAAT
AATATCACTTACTTTGCTGAATCTGCAGCAGCAGAAGATTGGGACCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGACCCATCTACTTATCTTGATGTCATCAAACCTTCAAGTGGTGAAAACACTAAGACTTATCTAGGATTTGATGCAGGTA
CGAATAACGCTGCAGCAGCACAAGTTGGTATGAACGAATATGAAAAGTTGTTGAATGAAGCTGAAAAAGAAACCACTAAT
ACGAATGCACGCTATGAAAAATATGCTGCAGCCCAAGCTTGGTTGACTGATAATGCTTTGGTTATTCCGACAACAACCTT
GACTGGTCGTCCAATTCTTTCTCGTACAGTGCCATTTACTAATCCATTTGCTTGGTCAGGAAACAAAGGGAATAGTGAAA
TCATTCTATATAAATATCTTGAACTCCAAGATGAGCCTGTGACTCAAAATCAATACAAGAAAGCAATGGAAAAATGGAAT
AAAAAGCGCACAGAATCTAATAAAAAGGCTCAAGAAGAACTTGCAGATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

61.061

100

0.612
  amiA3 Streptococcus thermophilus LMG 18311

60.455

100

0.605
  amiA Streptococcus salivarius strain HSISS4

60.152

100

0.602

Multiple sequence alignment