Detailed information NTG0155979

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: RN80_RS01090
• Genome accession: NZ_CP012646
• Coordinates: 193475..193909 (-)
• Length: 144 a.a.
• NCBI ID: WP_060627215.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain KCOM 1350 (= ChDC B183)
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 188475..198909

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RN80_RS01055 (RN80_01065)	rnpA	189000..189371 (-)	372	WP_060627209.1	ribonuclease P protein component	-
RN80_RS01060 (RN80_01070)	-	189521..190711 (-)	1191	WP_060627210.1	acetate kinase	-
RN80_RS01065 (RN80_01075)	comYH	190761..191714 (-)	954	WP_049515760.1	class I SAM-dependent methyltransferase	Machinery gene
RN80_RS01070 (RN80_01080)	-	191775..192362 (-)	588	WP_060627211.1	class I SAM-dependent methyltransferase	-
RN80_RS01075 (RN80_01085)	comGG/cglG	192395..192808 (-)	414	WP_060627212.1	competence type IV pilus minor pilin ComGG	Machinery gene
RN80_RS01080 (RN80_01090)	comGF/cglF	192786..193247 (-)	462	WP_060627213.1	competence type IV pilus minor pilin ComGF	Machinery gene
RN80_RS01085 (RN80_01095)	comGE/cglE	193210..193512 (-)	303	WP_253275437.1	competence type IV pilus minor pilin ComGE	Machinery gene
RN80_RS01090 (RN80_01100)	comGD/cglD	193475..193909 (-)	435	WP_060627215.1	competence type IV pilus minor pilin ComGD	Machinery gene
RN80_RS01095 (RN80_01105)	comGC/cglC	193872..194195 (-)	324	WP_060627216.1	competence type IV pilus major pilin ComGC	Machinery gene
RN80_RS01100 (RN80_01110)	comGB/cglB	194197..195213 (-)	1017	WP_080998467.1	competence type IV pilus assembly protein ComGB	Machinery gene
RN80_RS01105 (RN80_01115)	comGA/cglA/cilD	195161..196102 (-)	942	WP_060627217.1	competence type IV pilus ATPase ComGA	Machinery gene
RN80_RS01110 (RN80_01120)	-	196179..196544 (-)	366	WP_000286405.1	DUF1033 family protein	-
RN80_RS01115 (RN80_01125)	-	196694..197752 (-)	1059	WP_060627218.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15843.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=155979 RN80_RS01090 WP_060627215.1 193475..193909(-) (comGD/cglD) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
MLNKVPVKVFQIKAFTMFESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLSIDGKT
ISNGSQKLTVPKGIQALSGQSITFDRVGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=155979 RN80_RS01090 WP_060627215.1 193475..193909(-) (comGD/cglD) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
ATGTTAAACAAGGTACCAGTCAAAGTGTTTCAGATTAAGGCCTTTACCATGTTTGAAAGTCTATTGGTTTTGGGTCTTGT
GAGTATCCTTGCCTTGGGCTTGTCTGGCTCTGTCCAGTCCACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACTCAAAAACGCAGTGTAGCTAGTCAGCAAAAGACAAGTTTGAGCATAGACGGAAAGACC
ATTAGCAATGGCAGTCAAAAGCTGACAGTTCCTAAAGGAATTCAAGCACTATCGGGACAAAGTATCACATTTGACCGAGT
TGGAGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCTATTCGCTATCAGTTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	93.75	100	0.938
comGD/cglD	Streptococcus pneumoniae Rx1	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae D39	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae R6	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae TIGR4	93.233	92.361	0.861
comGD/cglD	Streptococcus mitis SK321	93.233	92.361	0.861
comYD	Streptococcus gordonii str. Challis substr. CH1	54.478	93.056	0.507
comYD	Streptococcus mutans UA140	48.062	89.583	0.431
comYD	Streptococcus mutans UA159	48.062	89.583	0.431