Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | ECTOBSL9_RS01955 | Genome accession | NZ_CP011994 |
| Coordinates | 377794..379002 (+) | Length | 402 a.a. |
| NCBI ID | WP_063463643.1 | Uniprot ID | A0A167A088 |
| Organism | Ectothiorhodospira sp. BSL-9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 372794..384002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTOBSL9_RS01940 (ECTOBSL9_0388) | - | 372897..374537 (+) | 1641 | WP_205631987.1 | nitrogen regulation protein NR(II) | - |
| ECTOBSL9_RS01945 (ECTOBSL9_0389) | pilR | 374559..375920 (+) | 1362 | WP_063463641.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ECTOBSL9_RS01950 (ECTOBSL9_0390) | pilB | 376075..377790 (+) | 1716 | WP_063463642.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| ECTOBSL9_RS01955 (ECTOBSL9_0391) | pilC | 377794..379002 (+) | 1209 | WP_063463643.1 | type II secretion system F family protein | Machinery gene |
| ECTOBSL9_RS01960 (ECTOBSL9_0392) | pilD | 379011..379874 (+) | 864 | WP_063465949.1 | A24 family peptidase | Machinery gene |
| ECTOBSL9_RS01965 (ECTOBSL9_0393) | coaE | 379874..380473 (+) | 600 | WP_063463644.1 | dephospho-CoA kinase | - |
| ECTOBSL9_RS01970 (ECTOBSL9_0394) | zapD | 380531..381373 (+) | 843 | WP_082829683.1 | cell division protein ZapD | - |
| ECTOBSL9_RS01975 (ECTOBSL9_0395) | - | 381398..381907 (-) | 510 | WP_156500015.1 | hypothetical protein | - |
| ECTOBSL9_RS01980 (ECTOBSL9_0396) | - | 381920..382897 (-) | 978 | WP_063463646.1 | Nudix family hydrolase | - |
Sequence
Protein
Download Length: 402 a.a. Molecular weight: 43992.52 Da Isoelectric Point: 9.5510
>NTDB_id=149961 ECTOBSL9_RS01955 WP_063463643.1 377794..379002(+) (pilC) [Ectothiorhodospira sp. BSL-9]
MAETMTVFVWEGVDKKGARVKGETTAANENLAKADLRRQGINPLKVRKKPKPLFGGKKKITPKDIAVFLRQMSTMMSAGV
PLVQAFEIVGRGHENPSMQELILRIKSDVEGGSTFASALAKHPLYFDNLVVNLVGAGEQSGALETLLDRIATYKEKTESL
KAKIKKAMFYPAAVIVVAFIVTAILLIFVVPQFQDLFQGFGADLPVFTQFVIGISDFFQNYWWAIFGGIGLAVFAFTQGK
RRSPGFRRQLDLWSLRVPVVGELLRKASIARFARTLSTMFSAGVPLVEAMQSVAGATGNALYYEATMRMRDETAGGTQLQ
QAMRNTGVFPNMVVQMVAIGEESGSLDEMLSKVADFYEEEVDNMVDGLSSLMEPMIMAFLGVVVGGLVIAMYLPIFQLGA
VV
MAETMTVFVWEGVDKKGARVKGETTAANENLAKADLRRQGINPLKVRKKPKPLFGGKKKITPKDIAVFLRQMSTMMSAGV
PLVQAFEIVGRGHENPSMQELILRIKSDVEGGSTFASALAKHPLYFDNLVVNLVGAGEQSGALETLLDRIATYKEKTESL
KAKIKKAMFYPAAVIVVAFIVTAILLIFVVPQFQDLFQGFGADLPVFTQFVIGISDFFQNYWWAIFGGIGLAVFAFTQGK
RRSPGFRRQLDLWSLRVPVVGELLRKASIARFARTLSTMFSAGVPLVEAMQSVAGATGNALYYEATMRMRDETAGGTQLQ
QAMRNTGVFPNMVVQMVAIGEESGSLDEMLSKVADFYEEEVDNMVDGLSSLMEPMIMAFLGVVVGGLVIAMYLPIFQLGA
VV
Nucleotide
Download Length: 1209 bp
>NTDB_id=149961 ECTOBSL9_RS01955 WP_063463643.1 377794..379002(+) (pilC) [Ectothiorhodospira sp. BSL-9]
ATGGCCGAGACAATGACCGTGTTTGTCTGGGAAGGCGTGGACAAGAAGGGAGCCCGGGTCAAGGGAGAGACCACGGCCGC
CAACGAGAACCTGGCCAAGGCGGATCTGCGCCGCCAGGGTATCAATCCCCTCAAGGTCCGCAAGAAACCCAAGCCCCTGT
TCGGTGGCAAGAAGAAGATCACGCCCAAGGATATCGCCGTGTTCCTGCGGCAGATGTCCACCATGATGAGCGCTGGCGTG
CCCCTGGTGCAGGCCTTCGAGATCGTCGGGCGGGGCCATGAAAACCCCTCCATGCAGGAGCTCATCCTGCGCATCAAATC
GGATGTTGAAGGCGGTTCCACCTTCGCCAGCGCCCTGGCCAAGCACCCGCTCTACTTCGATAACCTGGTGGTCAACCTGG
TGGGGGCCGGCGAACAATCGGGTGCGCTGGAGACGCTGCTGGATCGCATCGCCACGTACAAGGAAAAGACCGAGTCCCTC
AAGGCCAAGATCAAGAAGGCCATGTTCTACCCGGCAGCGGTCATCGTGGTGGCCTTCATCGTCACCGCCATCCTGCTGAT
CTTCGTGGTGCCCCAGTTCCAGGACCTGTTCCAGGGCTTTGGCGCCGACCTGCCCGTGTTCACCCAGTTCGTGATCGGCA
TTTCCGATTTCTTCCAGAACTACTGGTGGGCCATCTTCGGGGGGATTGGTCTGGCGGTATTCGCCTTCACTCAGGGCAAG
CGACGATCTCCCGGCTTCCGGCGCCAGCTGGACCTGTGGTCCTTGAGGGTCCCGGTGGTGGGTGAACTGCTGCGCAAGGC
CTCCATCGCCCGTTTTGCCCGCACCCTGTCCACCATGTTCTCCGCCGGGGTACCGCTGGTGGAGGCCATGCAGTCGGTGG
CGGGGGCCACCGGCAATGCCCTGTACTACGAAGCCACCATGCGCATGCGGGACGAAACCGCCGGCGGCACCCAGTTGCAG
CAGGCCATGCGCAATACCGGGGTATTCCCCAACATGGTGGTGCAGATGGTGGCCATCGGCGAGGAATCCGGGTCCCTGGA
CGAGATGCTGAGCAAGGTGGCGGACTTCTATGAAGAGGAGGTGGACAACATGGTGGATGGCCTCTCCAGCCTCATGGAGC
CCATGATCATGGCCTTCCTCGGGGTCGTGGTGGGCGGCCTGGTGATCGCCATGTATCTGCCCATCTTCCAGCTGGGAGCA
GTGGTGTGA
ATGGCCGAGACAATGACCGTGTTTGTCTGGGAAGGCGTGGACAAGAAGGGAGCCCGGGTCAAGGGAGAGACCACGGCCGC
CAACGAGAACCTGGCCAAGGCGGATCTGCGCCGCCAGGGTATCAATCCCCTCAAGGTCCGCAAGAAACCCAAGCCCCTGT
TCGGTGGCAAGAAGAAGATCACGCCCAAGGATATCGCCGTGTTCCTGCGGCAGATGTCCACCATGATGAGCGCTGGCGTG
CCCCTGGTGCAGGCCTTCGAGATCGTCGGGCGGGGCCATGAAAACCCCTCCATGCAGGAGCTCATCCTGCGCATCAAATC
GGATGTTGAAGGCGGTTCCACCTTCGCCAGCGCCCTGGCCAAGCACCCGCTCTACTTCGATAACCTGGTGGTCAACCTGG
TGGGGGCCGGCGAACAATCGGGTGCGCTGGAGACGCTGCTGGATCGCATCGCCACGTACAAGGAAAAGACCGAGTCCCTC
AAGGCCAAGATCAAGAAGGCCATGTTCTACCCGGCAGCGGTCATCGTGGTGGCCTTCATCGTCACCGCCATCCTGCTGAT
CTTCGTGGTGCCCCAGTTCCAGGACCTGTTCCAGGGCTTTGGCGCCGACCTGCCCGTGTTCACCCAGTTCGTGATCGGCA
TTTCCGATTTCTTCCAGAACTACTGGTGGGCCATCTTCGGGGGGATTGGTCTGGCGGTATTCGCCTTCACTCAGGGCAAG
CGACGATCTCCCGGCTTCCGGCGCCAGCTGGACCTGTGGTCCTTGAGGGTCCCGGTGGTGGGTGAACTGCTGCGCAAGGC
CTCCATCGCCCGTTTTGCCCGCACCCTGTCCACCATGTTCTCCGCCGGGGTACCGCTGGTGGAGGCCATGCAGTCGGTGG
CGGGGGCCACCGGCAATGCCCTGTACTACGAAGCCACCATGCGCATGCGGGACGAAACCGCCGGCGGCACCCAGTTGCAG
CAGGCCATGCGCAATACCGGGGTATTCCCCAACATGGTGGTGCAGATGGTGGCCATCGGCGAGGAATCCGGGTCCCTGGA
CGAGATGCTGAGCAAGGTGGCGGACTTCTATGAAGAGGAGGTGGACAACATGGTGGATGGCCTCTCCAGCCTCATGGAGC
CCATGATCATGGCCTTCCTCGGGGTCGTGGTGGGCGGCCTGGTGATCGCCATGTATCTGCCCATCTTCCAGCTGGGAGCA
GTGGTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Pseudomonas stutzeri DSM 10701 |
62.972 |
98.756 |
0.622 |
| pilC | Acinetobacter baumannii D1279779 |
60.05 |
100 |
0.602 |
| pilC | Acinetobacter baylyi ADP1 |
58.955 |
100 |
0.59 |
| pilC | Legionella pneumophila strain ERS1305867 |
58.647 |
99.254 |
0.582 |
| pilG | Neisseria meningitidis 44/76-A |
48.232 |
98.507 |
0.475 |
| pilG | Neisseria gonorrhoeae MS11 |
48.232 |
98.507 |
0.475 |
| pilC | Vibrio campbellii strain DS40M4 |
43.358 |
99.254 |
0.43 |
| pilC | Vibrio cholerae strain A1552 |
42.424 |
98.507 |
0.418 |
| pilC | Thermus thermophilus HB27 |
39.552 |
100 |
0.396 |