Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | XI92_RS02050 | Genome accession | NZ_CP011349 |
| Coordinates | 449785..450117 (-) | Length | 110 a.a. |
| NCBI ID | WP_001082769.1 | Uniprot ID | A0A9W5QHQ8 |
| Organism | Bacillus thuringiensis strain YC-10 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 444785..455117
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XI92_RS02025 (XI92_02025) | - | 445612..446388 (-) | 777 | WP_000637451.1 | class I SAM-dependent methyltransferase | - |
| XI92_RS02030 (XI92_02030) | - | 446438..446872 (-) | 435 | WP_000063706.1 | BrxA/BrxB family bacilliredoxin | - |
| XI92_RS02035 (XI92_02035) | - | 446956..447339 (-) | 384 | WP_000634884.1 | DCC1-like thiol-disulfide oxidoreductase family protein | - |
| XI92_RS02040 (XI92_02040) | - | 447343..448470 (-) | 1128 | WP_000692580.1 | conserved virulence factor C family protein | - |
| XI92_RS02045 (XI92_02045) | - | 448888..449448 (+) | 561 | WP_000714949.1 | AAA family ATPase | - |
| XI92_RS02050 (XI92_02050) | ssbA | 449785..450117 (-) | 333 | WP_001082769.1 | single-stranded DNA-binding protein | Machinery gene |
| XI92_RS02055 (XI92_02055) | - | 450458..451549 (-) | 1092 | WP_001259000.1 | hypothetical protein | - |
| XI92_RS34945 (XI92_02060) | - | 451931..452661 (+) | 731 | Protein_417 | transposase | - |
| XI92_RS02065 (XI92_02065) | - | 452825..453334 (-) | 510 | WP_001089284.1 | hypothetical protein | - |
| XI92_RS02070 (XI92_02070) | - | 453648..453884 (+) | 237 | WP_000021280.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 110 a.a. Molecular weight: 12610.39 Da Isoelectric Point: 9.4344
>NTDB_id=144971 XI92_RS02050 WP_001082769.1 449785..450117(-) (ssbA) [Bacillus thuringiensis strain YC-10]
MNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVAEYCKKGSLVGITGRIQTSN
YDDEQGKRIYRTEVVIESITFLERRREGAS
MNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVAEYCKKGSLVGITGRIQTSN
YDDEQGKRIYRTEVVIESITFLERRREGAS
Nucleotide
Download Length: 333 bp
>NTDB_id=144971 XI92_RS02050 WP_001082769.1 449785..450117(-) (ssbA) [Bacillus thuringiensis strain YC-10]
TTGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTCGCTTATGCACG
AATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTTGGC
GCAAATCGGCTGAGAATGTAGCTGAATATTGTAAGAAGGGGTCGCTCGTTGGGATTACAGGGCGTATTCAGACTAGTAAT
TACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCGGGA
GGGGGCATCGTAA
TTGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTCGCTTATGCACG
AATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTTGGC
GCAAATCGGCTGAGAATGTAGCTGAATATTGTAAGAAGGGGTCGCTCGTTGGGATTACAGGGCGTATTCAGACTAGTAAT
TACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCGGGA
GGGGGCATCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.048 |
95.455 |
0.564 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.19 |
95.455 |
0.536 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.351 |
100 |
0.518 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
45.714 |
95.455 |
0.436 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.519 |
98.182 |
0.427 |
| ssbA | Streptococcus mutans UA159 |
40.741 |
98.182 |
0.4 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40.741 |
98.182 |
0.4 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
40.741 |
98.182 |
0.4 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
39.815 |
98.182 |
0.391 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
39.815 |
98.182 |
0.391 |
| ssbB/cilA | Streptococcus mitis SK321 |
39.815 |
98.182 |
0.391 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
39.815 |
98.182 |
0.391 |