Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EN71_RS03165 | Genome accession | NZ_CP007631 |
| Coordinates | 568125..568541 (+) | Length | 138 a.a. |
| NCBI ID | WP_000609374.1 | Uniprot ID | A0AAW6XS84 |
| Organism | Streptococcus agalactiae strain NGBS061 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 563125..573541
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EN71_RS11855 | - | 563171..563263 (-) | 93 | WP_109867766.1 | type I toxin-antitoxin system Fst family toxin | - |
| EN71_RS12025 | - | 563828..563998 (+) | 171 | WP_017644253.1 | hypothetical protein | - |
| EN71_RS03140 (EN72_03210) | - | 564175..564615 (+) | 441 | WP_000861097.1 | hypothetical protein | - |
| EN71_RS03145 (EN72_03215) | - | 564732..565646 (+) | 915 | WP_000514063.1 | conserved phage C-terminal domain-containing protein | - |
| EN71_RS03150 (EN72_03220) | - | 565656..566498 (+) | 843 | WP_000863938.1 | ATP-binding protein | - |
| EN71_RS12030 | - | 566498..566644 (+) | 147 | WP_000424130.1 | hypothetical protein | - |
| EN71_RS11375 | - | 566634..566810 (+) | 177 | WP_153299080.1 | hypothetical protein | - |
| EN71_RS11380 | - | 566813..566974 (+) | 162 | WP_001288192.1 | hypothetical protein | - |
| EN71_RS03155 (EN72_03240) | - | 566975..567457 (+) | 483 | WP_000323862.1 | siphovirus Gp157 family protein | - |
| EN71_RS03160 (EN72_03245) | - | 567458..568132 (+) | 675 | WP_000063051.1 | ERF family protein | - |
| EN71_RS03165 (EN72_03250) | ssb | 568125..568541 (+) | 417 | WP_000609374.1 | single-stranded DNA-binding protein | Machinery gene |
| EN71_RS03170 (EN72_03255) | - | 568544..568744 (+) | 201 | WP_000165748.1 | hypothetical protein | - |
| EN71_RS03175 (EN72_03260) | - | 568734..569222 (+) | 489 | WP_001009815.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EN71_RS03180 (EN72_03265) | - | 569203..569548 (+) | 346 | Protein_559 | hypothetical protein | - |
| EN71_RS03185 (EN72_03270) | - | 569560..569856 (+) | 297 | WP_038405996.1 | nucleotide modification associated domain-containing protein | - |
| EN71_RS12035 | - | 569840..569998 (+) | 159 | WP_017646174.1 | hypothetical protein | - |
| EN71_RS12040 | - | 570050..570214 (+) | 165 | WP_162489522.1 | hypothetical protein | - |
| EN71_RS12045 | - | 570218..570361 (+) | 144 | WP_000564610.1 | hypothetical protein | - |
| EN71_RS03190 (EN72_03290) | - | 570358..570858 (+) | 501 | WP_001019152.1 | DUF1642 domain-containing protein | - |
| EN71_RS03195 (EN72_03295) | - | 570879..571178 (+) | 300 | WP_001105092.1 | hypothetical protein | - |
| EN71_RS03200 (EN72_03300) | - | 571196..571462 (+) | 267 | WP_000660740.1 | hypothetical protein | - |
| EN71_RS03205 (EN72_03305) | - | 571854..572288 (+) | 435 | WP_000142571.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 138 a.a. Molecular weight: 15671.37 Da Isoelectric Point: 6.7196
>NTDB_id=121832 EN71_RS03165 WP_000609374.1 568125..568541(+) (ssb) [Streptococcus agalactiae strain NGBS061]
MINNIVLVGRMTKDAELRHTPSQVAVATFTLAVNRRFKEQNGERETDFINCVIWRQSAENLANWAKKGTLIGITGHIQTR
NYENQQGQRIYVTEVVAENFQLLESRNSQQQTNQSGNSSNSHFGNANKMDISDDDLPF
MINNIVLVGRMTKDAELRHTPSQVAVATFTLAVNRRFKEQNGERETDFINCVIWRQSAENLANWAKKGTLIGITGHIQTR
NYENQQGQRIYVTEVVAENFQLLESRNSQQQTNQSGNSSNSHFGNANKMDISDDDLPF
Nucleotide
Download Length: 417 bp
>NTDB_id=121832 EN71_RS03165 WP_000609374.1 568125..568541(+) (ssb) [Streptococcus agalactiae strain NGBS061]
ATGATTAATAATATTGTACTTGTAGGTCGCATGACCAAGGATGCCGAACTTCGTCACACGCCAAGTCAAGTAGCTGTAGC
TACGTTTACACTTGCAGTTAACCGCAGATTCAAAGAGCAAAACGGAGAGCGAGAGACGGACTTCATTAATTGTGTTATCT
GGCGACAATCTGCTGAAAATCTAGCAAACTGGGCTAAAAAAGGGACTTTAATCGGTATCACAGGGCACATTCAGACACGC
AATTACGAAAATCAGCAAGGGCAACGTATCTATGTAACAGAAGTTGTTGCGGAAAATTTCCAATTATTAGAAAGTCGCAA
TAGCCAACAACAGACTAATCAAAGCGGCAATAGTTCTAATTCTCATTTTGGCAATGCCAACAAAATGGATATTTCAGATG
ATGACTTACCATTCTAA
ATGATTAATAATATTGTACTTGTAGGTCGCATGACCAAGGATGCCGAACTTCGTCACACGCCAAGTCAAGTAGCTGTAGC
TACGTTTACACTTGCAGTTAACCGCAGATTCAAAGAGCAAAACGGAGAGCGAGAGACGGACTTCATTAATTGTGTTATCT
GGCGACAATCTGCTGAAAATCTAGCAAACTGGGCTAAAAAAGGGACTTTAATCGGTATCACAGGGCACATTCAGACACGC
AATTACGAAAATCAGCAAGGGCAACGTATCTATGTAACAGAAGTTGTTGCGGAAAATTTCCAATTATTAGAAAGTCGCAA
TAGCCAACAACAGACTAATCAAAGCGGCAATAGTTCTAATTCTCATTTTGGCAATGCCAACAAAATGGATATTTCAGATG
ATGACTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.118 |
100 |
0.667 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.907 |
100 |
0.659 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.203 |
100 |
0.442 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.203 |
100 |
0.442 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.478 |
100 |
0.435 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.478 |
100 |
0.435 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.478 |
100 |
0.435 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.478 |
100 |
0.435 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.478 |
100 |
0.435 |
| ssbA | Streptococcus mutans UA159 |
41.304 |
100 |
0.413 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
47.788 |
81.884 |
0.391 |
| ssb | Glaesserella parasuis strain SC1401 |
28.814 |
100 |
0.37 |