Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ACLV7D_RS01775 | Genome accession | NZ_OZ217345 |
| Coordinates | 348887..349282 (+) | Length | 131 a.a. |
| NCBI ID | WP_115903952.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis F22 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 343887..354282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7D_RS01730 (SMIF22_03340) | - | 344212..344715 (+) | 504 | WP_218764805.1 | phosphatase PAP2 family protein | - |
| ACLV7D_RS01735 (SMIF22_03350) | - | 344935..345381 (+) | 447 | WP_218764804.1 | LytTR family DNA-binding domain-containing protein | - |
| ACLV7D_RS01740 (SMIF22_03360) | - | 345386..346060 (+) | 675 | WP_050243275.1 | hypothetical protein | - |
| ACLV7D_RS01745 (SMIF22_03370) | - | 346304..346501 (+) | 198 | Protein_310 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| ACLV7D_RS01750 | - | 346526..346657 (-) | 132 | WP_268810481.1 | hypothetical protein | - |
| ACLV7D_RS01755 (SMIF22_03380) | - | 346751..347050 (+) | 300 | WP_218764802.1 | DUF4651 domain-containing protein | - |
| ACLV7D_RS01760 (SMIF22_03390) | - | 347047..347364 (+) | 318 | WP_000615777.1 | thioredoxin family protein | - |
| ACLV7D_RS01765 (SMIF22_03400) | ytpR | 347380..348006 (+) | 627 | WP_218764801.1 | YtpR family tRNA-binding protein | - |
| ACLV7D_RS01770 (SMIF22_03410) | - | 348048..348809 (+) | 762 | WP_218764800.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ACLV7D_RS01775 (SMIF22_03420) | ssbB/cilA | 348887..349282 (+) | 396 | WP_115903952.1 | single-stranded DNA-binding protein | Machinery gene |
| ACLV7D_RS01780 (SMIF22_03430) | - | 349523..350488 (+) | 966 | WP_218764799.1 | substrate-binding domain-containing protein | - |
| ACLV7D_RS01785 (SMIF22_03440) | - | 350488..351825 (+) | 1338 | WP_218764798.1 | sensor histidine kinase | - |
| ACLV7D_RS01790 (SMIF22_03450) | - | 351800..352483 (+) | 684 | WP_078237995.1 | response regulator transcription factor | - |
| ACLV7D_RS01795 (SMIF22_03460) | - | 352480..353772 (+) | 1293 | WP_218764797.1 | ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14866.80 Da Isoelectric Point: 5.9409
>NTDB_id=1170350 ACLV7D_RS01775 WP_115903952.1 348887..349282(+) (ssbB/cilA) [Streptococcus mitis isolate S. mitis F22]
MYNKVILIGRLTSTPELHKTSNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAESLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVILIGRLTSTPELHKTSNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAESLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1170350 ACLV7D_RS01775 WP_115903952.1 348887..349282(+) (ssbB/cilA) [Streptococcus mitis isolate S. mitis F22]
ATGTATAATAAAGTTATCTTGATTGGCCGTTTGACGTCTACACCAGAATTGCACAAAACCAGCAATGACAAGTCAGTAGC
ACGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAATGGGGAGCGTGAAGCTGATTTTGTTAATATGGTTTTAT
GGGGTAGACTAGCAGAAAGCTTGGCAAGCTACGCAACAAAAGGTAGTCTCATTTCAGTGGATGGGGAATTACGTACACGT
CGTTTTGAGAAAAATGGTCAGATGAACTACGTGACCGAAGTCCTCGTCACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGAGAAAATAACGCTGGGCAAGATTTGGCAGATTTGGTTTTGGAAGAGGAAGAACTACCGTTTTAA
ATGTATAATAAAGTTATCTTGATTGGCCGTTTGACGTCTACACCAGAATTGCACAAAACCAGCAATGACAAGTCAGTAGC
ACGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAATGGGGAGCGTGAAGCTGATTTTGTTAATATGGTTTTAT
GGGGTAGACTAGCAGAAAGCTTGGCAAGCTACGCAACAAAAGGTAGTCTCATTTCAGTGGATGGGGAATTACGTACACGT
CGTTTTGAGAAAAATGGTCAGATGAACTACGTGACCGAAGTCCTCGTCACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGAGAAAATAACGCTGGGCAAGATTTGGCAGATTTGGTTTTGGAAGAGGAAGAACTACCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
97.71 |
100 |
0.977 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
97.71 |
100 |
0.977 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
97.71 |
100 |
0.977 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
97.71 |
100 |
0.977 |
| ssbB/cilA | Streptococcus mitis SK321 |
97.71 |
100 |
0.977 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
71.756 |
100 |
0.718 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
48.673 |
86.26 |
0.42 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.887 |
80.916 |
0.42 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
45.37 |
82.443 |
0.374 |