Detailed information NTG1169952

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACLV7H_RS03245
• Genome accession: NZ_OZ217340
• Coordinates: 600740..601210 (+)
• Length: 156 a.a.
• NCBI ID: WP_411866348.1
• Uniprot ID: -
• Organism: Streptococcus oralis isolate S. oralis A22
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 595740..606210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7H_RS03215 (SORA22_06380)	-	595925..596473 (-)	549	WP_411866343.1	NAD(P)H-dependent oxidoreductase	-
ACLV7H_RS03220 (SORA22_06390)	-	596565..597011 (-)	447	WP_411866344.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACLV7H_RS03225 (SORA22_06400)	-	597130..597606 (+)	477	WP_045592328.1	DUF5590 domain-containing protein	-
ACLV7H_RS03230 (SORA22_06410)	-	597616..598794 (+)	1179	WP_411866345.1	pyridoxal phosphate-dependent aminotransferase	-
ACLV7H_RS03235 (SORA22_06420)	asnS	598946..600289 (+)	1344	WP_411866346.1	asparagine--tRNA ligase	-
ACLV7H_RS03240 (SORA22_06430)	rpsF	600438..600728 (+)	291	WP_411866347.1	30S ribosomal protein S6	-
ACLV7H_RS03245 (SORA22_06440)	ssbA	600740..601210 (+)	471	WP_411866348.1	single-stranded DNA-binding protein SsbA	Machinery gene
ACLV7H_RS03250 (SORA22_06450)	rpsR	601242..601481 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
ACLV7H_RS03255 (SORA22_06460)	-	601792..602301 (+)	510	WP_411866349.1	GNAT family N-acetyltransferase	-
ACLV7H_RS03260 (SORA22_06470)	wecB	602738..603886 (+)	1149	WP_411866350.1	non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase	-
ACLV7H_RS03265 (SORA22_06480)	-	603893..604672 (+)	780	WP_411866351.1	hypothetical protein	-
ACLV7H_RS03270 (SORA22_06500)	-	604815..606125 (+)	1311	WP_411866352.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17168.05 Da
• Isoelectric Point: 5.2065

>NTDB_id=1169952 ACLV7H_RS03245 WP_411866348.1 600740..601210(+) (ssbA) [Streptococcus oralis isolate S. oralis A22]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHSGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=1169952 ACLV7H_RS03245 WP_411866348.1 600740..601210(+) (ssbA) [Streptococcus oralis isolate S. oralis A22]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACTCGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTCAAGAGTCAAAATGGCGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCTCTTATCGGGGTCACAGGCCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGCGAAGGACATTCAGGTGGAGCTTATTCTGCACCAACTGCTGGTCAATCGGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAGAATCCATTTGGAGCAACAAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.814	100	0.615
ssb	Latilactobacillus sakei subsp. sakei 23K	53.409	100	0.603
ssb	Neisseria gonorrhoeae MS11	34.286	100	0.385
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae R6	50.427	75	0.378
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus pneumoniae D39	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssb	Neisseria meningitidis MC58	33.143	100	0.372