Detailed information NTG1161734

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: U8955_RS08045
• Genome accession: NZ_OY769914
• Coordinates: 1593459..1593854 (-)
• Length: 131 a.a.
• NCBI ID: WP_038804476.1
• Uniprot ID: A0A7T3DY75
• Organism: Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1588459..1598854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U8955_RS08020 (SDENT7746_08040)	recX	1589018..1589794 (+)	777	WP_038804472.1	recombination regulator RecX	-
U8955_RS08025 (SDENT7746_08045)	-	1589883..1590416 (+)	534	WP_038804473.1	DUF402 domain-containing protein	-
U8955_RS08030 (SDENT7746_08050)	-	1590488..1591255 (-)	768	WP_000567567.1	epoxyqueuosine reductase QueH	-
U8955_RS08035 (SDENT7746_08055)	groL	1591380..1593002 (-)	1623	WP_038804474.1	chaperonin GroEL	-
U8955_RS08040 (SDENT7746_08060)	groES	1593018..1593302 (-)	285	WP_038804475.1	co-chaperone GroES	-
U8955_RS08045 (SDENT7746_08065)	ssbB/cilA	1593459..1593854 (-)	396	WP_038804476.1	single-stranded DNA-binding protein	Machinery gene
U8955_RS08050 (SDENT7746_08070)	-	1593931..1594692 (-)	762	WP_038804477.1	SDR family NAD(P)-dependent oxidoreductase	-
U8955_RS08055 (SDENT7746_08075)	ytpR	1594735..1595361 (-)	627	WP_038804479.1	YtpR family tRNA-binding protein	-
U8955_RS08060 (SDENT7746_08080)	-	1595377..1595694 (-)	318	WP_038804480.1	thioredoxin family protein	-
U8955_RS08065 (SDENT7746_08085)	-	1595691..1595990 (-)	300	WP_038804481.1	DUF4651 domain-containing protein	-
U8955_RS08070 (SDENT7746_08090)	-	1596166..1597773 (-)	1608	WP_038804482.1	CTP synthase	-
U8955_RS08075 (SDENT7746_08095)	rpoE	1598105..1598695 (-)	591	WP_000418420.1	DNA-directed RNA polymerase subunit delta	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14851.79 Da
• Isoelectric Point: 5.9409

>NTDB_id=1161734 U8955_RS08045 WP_038804476.1 1593459..1593854(-) (ssbB/cilA) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNLVLWGKLAETMASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLATGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1161734 U8955_RS08045 WP_038804476.1 1593459..1593854(-) (ssbB/cilA) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTGGC
TCGCGCAACTATTGCTGTGAACCGTCGTTACAAAGACCAAAATGGGGAACGCGAAGCTGACTTTGTCAATCTGGTTCTTT
GGGGAAAATTGGCTGAAACCATGGCAAGTTACGCGACCAAAGGAAGCCTCATTTCAGTAGATGGGGAACTACGTACCCGT
CGCTTCGAGAAAAATGGCCAGATGAACTACGTGACTGAAGTTCTTGCCACAGGATTCCAACTTTTGGAAAGCCGCGCCCA
ACGGGCTATGCGTGAAAATAACGCTGGACAGGATTTGGCCGATTTGGTCTTGGAAGAGGAGGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A7T3DY75

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	96.947	100	0.969
ssbB/cilA	Streptococcus mitis NCTC 12261	96.183	100	0.962
ssbB/cilA	Streptococcus pneumoniae Rx1	96.183	100	0.962
ssbB/cilA	Streptococcus pneumoniae D39	96.183	100	0.962
ssbB/cilA	Streptococcus pneumoniae R6	96.183	100	0.962
ssbB/cilA	Streptococcus mitis SK321	96.183	100	0.962
ssbA	Streptococcus mutans UA159	74.809	100	0.748
ssbB	Streptococcus sobrinus strain NIDR 6715-7	71.756	100	0.718
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	46.296	82.443	0.382