Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | KJP56_RS20050 | Genome accession | NZ_OX419652 |
| Coordinates | 3760890..3761231 (-) | Length | 113 a.a. |
| NCBI ID | WP_014478203.1 | Uniprot ID | A0A0C3GLH9 |
| Organism | Bacillus subtilis isolate NRS6131 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3755890..3766231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP56_RS20035 (NRS6131_19840) | hepA | 3756130..3758898 (+) | 2769 | WP_069322953.1 | DEAD/DEAH box helicase | - |
| KJP56_RS20040 (NRS6131_19845) | ywpJ | 3759026..3759883 (-) | 858 | WP_095252517.1 | phosphatase YwpJ | - |
| KJP56_RS20045 (NRS6131_19850) | glcR | 3759889..3760665 (-) | 777 | WP_213419395.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KJP56_RS20050 (NRS6131_19855) | ssbB | 3760890..3761231 (-) | 342 | WP_014478203.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| KJP56_RS20055 (NRS6131_19860) | ywpG | 3761308..3761691 (-) | 384 | WP_003227796.1 | DynA interaction protein YwpG | - |
| KJP56_RS20060 (NRS6131_19865) | ywpF | 3761866..3762276 (+) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| KJP56_RS20065 (NRS6131_19870) | - | 3762403..3763041 (-) | 639 | WP_201757480.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12462.11 Da Isoelectric Point: 7.8150
>NTDB_id=1158100 KJP56_RS20050 WP_014478203.1 3760890..3761231(-) (ssbB) [Bacillus subtilis isolate NRS6131]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=1158100 KJP56_RS20050 WP_014478203.1 3760890..3761231(-) (ssbB) [Bacillus subtilis isolate NRS6131]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGTAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGGAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGTAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGGAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
99.115 |
100 |
0.991 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |