Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | CKV84_RS09380 | Genome accession | NZ_LT906452 |
| Coordinates | 2045930..2046343 (-) | Length | 137 a.a. |
| NCBI ID | WP_013101573.1 | Uniprot ID | A0A128T2Y7 |
| Organism | Legionella pneumophila strain NCTC11985 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2040930..2051343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV84_RS09370 (SAMEA4040028_01860) | letS | 2041859..2044591 (+) | 2733 | WP_027220386.1 | two-component system sensor histidine kinase LetS | Regulator |
| CKV84_RS09375 (SAMEA4040028_01861) | - | 2044689..2045933 (+) | 1245 | WP_011214166.1 | 6-phosphofructokinase | - |
| CKV84_RS09380 (SAMEA4040028_01862) | pilA2 | 2045930..2046343 (-) | 414 | WP_013101573.1 | pilin | Machinery gene |
| CKV84_RS09385 (SAMEA4040028_01863) | pilA2 | 2046540..2046950 (-) | 411 | WP_014844212.1 | pilin | Machinery gene |
| CKV84_RS09390 (SAMEA4040028_01864) | - | 2047253..2047570 (+) | 318 | WP_010947633.1 | BolA family protein | - |
| CKV84_RS09395 (SAMEA4040028_01865) | - | 2047645..2049066 (+) | 1422 | WP_027220385.1 | APC family permease | - |
| CKV84_RS09400 (SAMEA4040028_01866) | - | 2049166..2050596 (-) | 1431 | WP_027220384.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14475.82 Da Isoelectric Point: 6.2016
>NTDB_id=1147442 CKV84_RS09380 WP_013101573.1 2045930..2046343(-) (pilA2) [Legionella pneumophila strain NCTC11985]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=1147442 CKV84_RS09380 WP_013101573.1 2045930..2046343(-) (pilA2) [Legionella pneumophila strain NCTC11985]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCTATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCTATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.012 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
46.207 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.842 |
100 |
0.409 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |