Detailed information NTG1143808

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: A8Q77_RS08280
• Genome accession: NZ_LT571436
• Coordinates: 1783815..1784312 (-)
• Length: 165 a.a.
• NCBI ID: WP_064130860.1
• Uniprot ID: -
• Organism: Neisseria weaveri strain NCTC13585
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1777710..1786086	1783815..1784312	within	0

Gene organization within MGE regions

Location: 1777710..1786086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A8Q77_RS08240 (SAMEA3174300_01652)	-	1777710..1778582 (-)	873	WP_004285223.1	Rossmann-like and DUF2520 domain-containing protein	-
A8Q77_RS08245 (SAMEA3174300_01653)	minC	1778678..1779397 (+)	720	WP_064130858.1	septum site-determining protein MinC	-
A8Q77_RS08250 (SAMEA3174300_01654)	minD	1779440..1780252 (+)	813	WP_004285221.1	septum site-determining protein MinD	-
A8Q77_RS08255 (SAMEA3174300_01655)	minE	1780256..1780519 (+)	264	WP_004285220.1	cell division topological specificity factor MinE	-
A8Q77_RS08260 (SAMEA3174300_01656)	-	1780523..1781443 (+)	921	WP_004285396.1	hydrogen peroxide-inducible genes activator	-
A8Q77_RS08265 (SAMEA3174300_01657)	-	1781621..1782067 (-)	447	WP_004285397.1	CopD family copper resistance protein	-
A8Q77_RS08270 (SAMEA3174300_01658)	-	1782199..1782402 (+)	204	WP_004285217.1	glycine zipper 2TM domain-containing protein	-
A8Q77_RS10820	-	1782599..1782988 (-)	390	WP_231987965.1	OmpA family protein	-
A8Q77_RS10825	-	1782983..1783438 (-)	456	Protein_1628	outer membrane protein assembly factor BamE	-
A8Q77_RS08280 (SAMEA3174300_01660)	pilE	1783815..1784312 (-)	498	WP_064130860.1	pilin	Machinery gene
A8Q77_RS08285 (SAMEA3174300_01661)	comE	1785781..1786086 (-)	306	WP_064130790.1	ComEA family DNA-binding protein	Machinery gene

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 17220.62 Da
• Isoelectric Point: 8.4258

>NTDB_id=1143808 A8Q77_RS08280 WP_064130860.1 1783815..1784312(-) (pilE) [Neisseria weaveri strain NCTC13585]
MKALQKGFTLIELMIVIAIIGILAVIALPAYQDYTARAQVSEAFSLAEGQKSAVTEYYADKGAWPANNSAAGVADKGDIK
GKYVESVEITTANSTGYITAKMKGSGVNEDIKGKTLVLKAIKEKGSFKWECDTTSSIATKFLPSVCRPDATASGSASSGS
PNQGG

Nucleotide

• Length: 498 bp

>NTDB_id=1143808 A8Q77_RS08280 WP_064130860.1 1783815..1784312(-) (pilE) [Neisseria weaveri strain NCTC13585]
ATGAAAGCTTTACAAAAAGGTTTTACTTTGATCGAGTTGATGATCGTTATTGCGATTATCGGTATTTTGGCGGTGATTGC
GCTGCCTGCTTACCAAGATTACACAGCGCGTGCACAAGTTTCTGAAGCGTTTTCTTTGGCTGAAGGCCAAAAATCTGCGG
TAACCGAATATTATGCCGATAAAGGTGCATGGCCTGCCAATAATTCAGCTGCAGGTGTAGCTGATAAGGGTGACATTAAG
GGCAAATATGTTGAATCTGTAGAGATTACTACAGCAAACAGCACAGGCTACATTACTGCAAAAATGAAAGGCAGCGGTGT
TAATGAAGATATTAAAGGTAAAACTTTAGTATTGAAAGCTATTAAAGAAAAAGGTTCATTTAAGTGGGAATGTGACACTA
CTAGTAGCATTGCTACAAAATTCCTGCCATCAGTTTGCCGTCCTGACGCAACTGCTTCAGGTTCTGCCAGCTCAGGTTCT
CCGAATCAAGGCGGTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-28)

• Pilin (bacterial filament) (Pilin) (36-147)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae MS11	59.88	100	0.606
pilE	Neisseria gonorrhoeae strain FA1090	55.952	100	0.57
pilA/pilA1	Eikenella corrodens VA1	43.038	95.758	0.412
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.764	95.152	0.388
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	40.385	94.545	0.382
comP	Acinetobacter baylyi ADP1	41.611	90.303	0.376
pilA2	Legionella pneumophila strain ERS1305867	42.361	87.273	0.37
pilA2	Legionella pneumophila str. Paris	42.361	87.273	0.37
pilA	Acinetobacter baumannii strain A118	37.654	98.182	0.37
pilA	Ralstonia pseudosolanacearum GMI1000	35.882	100	0.37