Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | FGL23_RS09425 | Genome accession | NZ_LR594049 |
| Coordinates | 1964756..1965151 (+) | Length | 131 a.a. |
| NCBI ID | WP_012130920.1 | Uniprot ID | A0AAQ4J6T1 |
| Organism | Streptococcus gordonii strain NCTC10231 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1959756..1970151
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL23_RS09390 (NCTC10231_01877) | - | 1959835..1960545 (+) | 711 | WP_061603413.1 | GntR family transcriptional regulator | - |
| FGL23_RS09395 (NCTC10231_01878) | - | 1960611..1961009 (+) | 399 | WP_061599483.1 | PTS sugar transporter subunit IIA | - |
| FGL23_RS09400 (NCTC10231_01879) | - | 1961006..1961476 (+) | 471 | WP_061599482.1 | PTS sugar transporter subunit IIB | - |
| FGL23_RS09405 (NCTC10231_01880) | - | 1961489..1962253 (+) | 765 | WP_061599481.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| FGL23_RS09410 (NCTC10231_01881) | - | 1962265..1963080 (+) | 816 | WP_061599480.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| FGL23_RS09415 (NCTC10231_01882) | - | 1963113..1964078 (+) | 966 | WP_061603414.1 | SIS domain-containing protein | - |
| FGL23_RS09420 (NCTC10231_01883) | - | 1964093..1964710 (+) | 618 | WP_061603415.1 | HAD family hydrolase | - |
| FGL23_RS09425 (NCTC10231_01884) | ssbB/cilA | 1964756..1965151 (+) | 396 | WP_012130920.1 | single-stranded DNA-binding protein | Machinery gene |
| FGL23_RS09430 (NCTC10231_01885) | - | 1965331..1966815 (+) | 1485 | WP_061603461.1 | DUF1846 domain-containing protein | - |
| FGL23_RS09435 (NCTC10231_01886) | - | 1966869..1967303 (-) | 435 | WP_061603416.1 | hypothetical protein | - |
| FGL23_RS10705 (NCTC10231_01887) | - | 1967313..1967477 (-) | 165 | WP_004193711.1 | hypothetical protein | - |
| FGL23_RS09440 (NCTC10231_01888) | - | 1967474..1967677 (-) | 204 | WP_061603417.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14766.59 Da Isoelectric Point: 6.2466
>NTDB_id=1127993 FGL23_RS09425 WP_012130920.1 1964756..1965151(+) (ssbB/cilA) [Streptococcus gordonii strain NCTC10231]
MYNKVIIIGRLTATPELHKTSNEKSVTRATIAVNRRYKDQNGEREADFINIVLWGKSAETLASYASKGSLISLDGELRTR
RYEKDGVTHYVTEVLGHGFQLLESRAQRAIRENNSGADLADLVLEEEELPF
MYNKVIIIGRLTATPELHKTSNEKSVTRATIAVNRRYKDQNGEREADFINIVLWGKSAETLASYASKGSLISLDGELRTR
RYEKDGVTHYVTEVLGHGFQLLESRAQRAIRENNSGADLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1127993 FGL23_RS09425 WP_012130920.1 1964756..1965151(+) (ssbB/cilA) [Streptococcus gordonii strain NCTC10231]
ATGTACAATAAAGTCATTATTATCGGTCGCTTGACGGCCACACCAGAATTGCACAAAACAAGCAATGAAAAATCTGTCAC
ACGCGCAACGATTGCTGTCAATCGCCGTTACAAGGATCAAAATGGTGAGCGCGAAGCAGACTTCATTAATATCGTCCTTT
GGGGCAAATCAGCTGAGACTCTAGCTAGTTATGCCAGCAAAGGAAGCTTAATTTCTCTAGACGGCGAATTACGGACCCGT
CGTTATGAGAAAGATGGTGTAACCCACTATGTCACAGAAGTGCTTGGTCATGGTTTCCAGCTTCTTGAAAGTCGTGCCCA
GCGGGCTATTCGTGAAAATAATTCTGGGGCTGATTTAGCTGACCTAGTCTTGGAAGAAGAGGAACTTCCTTTCTAA
ATGTACAATAAAGTCATTATTATCGGTCGCTTGACGGCCACACCAGAATTGCACAAAACAAGCAATGAAAAATCTGTCAC
ACGCGCAACGATTGCTGTCAATCGCCGTTACAAGGATCAAAATGGTGAGCGCGAAGCAGACTTCATTAATATCGTCCTTT
GGGGCAAATCAGCTGAGACTCTAGCTAGTTATGCCAGCAAAGGAAGCTTAATTTCTCTAGACGGCGAATTACGGACCCGT
CGTTATGAGAAAGATGGTGTAACCCACTATGTCACAGAAGTGCTTGGTCATGGTTTCCAGCTTCTTGAAAGTCGTGCCCA
GCGGGCTATTCGTGAAAATAATTCTGGGGCTGATTTAGCTGACCTAGTCTTGGAAGAAGAGGAACTTCCTTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus mitis SK321 |
83.206 |
100 |
0.832 |
| ssbA | Streptococcus mutans UA159 |
80.153 |
100 |
0.802 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
74.046 |
100 |
0.74 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
63.393 |
85.496 |
0.542 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.943 |
80.916 |
0.412 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
49.057 |
80.916 |
0.397 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
44.444 |
82.443 |
0.366 |