Detailed information NTG1127701

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: FGL05_RS08220
• Genome accession: NZ_LR594044
• Coordinates: 1670037..1670330 (-)
• Length: 97 a.a.
• NCBI ID: WP_020915989.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain NCTC8796
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1665037..1675330

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL05_RS08175 (NCTC8796_01723)	-	1665339..1665794 (-)	456	WP_231853254.1	ABC transporter permease	-
FGL05_RS08180 (NCTC8796_01724)	-	1665795..1665995 (-)	201	WP_058814360.1	hypothetical protein	-
FGL05_RS08185 (NCTC8796_01725)	-	1666012..1666209 (-)	198	WP_020915996.1	helix-turn-helix transcriptional regulator	-
FGL05_RS08190 (NCTC8796_01726)	-	1666369..1667568 (-)	1200	WP_020915995.1	acetate kinase	-
FGL05_RS08195 (NCTC8796_01727)	comYH	1667622..1668578 (-)	957	WP_020915994.1	class I SAM-dependent methyltransferase	Machinery gene
FGL05_RS08200 (NCTC8796_01728)	comGG	1668632..1668982 (-)	351	WP_020915993.1	competence type IV pilus minor pilin ComGG	-
FGL05_RS08205 (NCTC8796_01729)	comYF	1668954..1669391 (-)	438	WP_043894883.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGL05_RS08210 (NCTC8796_01730)	comYE	1669375..1669668 (-)	294	WP_020915991.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGL05_RS08215 (NCTC8796_01731)	comYD	1669622..1670053 (-)	432	WP_020915990.1	competence type IV pilus minor pilin ComGD	Machinery gene
FGL05_RS08220 (NCTC8796_01732)	comYC	1670037..1670330 (-)	294	WP_020915989.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL05_RS08225 (NCTC8796_01733)	comYB	1670330..1671373 (-)	1044	WP_020915988.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL05_RS08230 (NCTC8796_01734)	comYA	1671297..1672238 (-)	942	WP_020915987.1	competence type IV pilus ATPase ComGA	Machinery gene
FGL05_RS08235 (NCTC8796_01735)	-	1672310..1672678 (-)	369	WP_020915986.1	DUF1033 family protein	-

Sequence

Protein

• Length: 97 a.a.
• Molecular weight: 11018.16 Da
• Isoelectric Point: 10.1006

>NTDB_id=1127701 FGL05_RS08220 WP_020915989.1 1670037..1670330(-) (comYC) [Streptococcus lutetiensis strain NCTC8796]
MKNIWKKLRKKSVEAFTLVEMLIVLLIIGVLMLLFVPNLSKQKEVVHEKGDAAVVKVVESQMELYEVKTGKQPTVNDLVK
AEYISKDQAQTYNAAKK

Nucleotide

• Length: 294 bp

>NTDB_id=1127701 FGL05_RS08220 WP_020915989.1 1670037..1670330(-) (comYC) [Streptococcus lutetiensis strain NCTC8796]
ATGAAAAACATTTGGAAAAAACTACGTAAAAAGTCTGTAGAAGCTTTTACACTTGTGGAGATGTTGATTGTTTTGCTAAT
CATTGGTGTCTTGATGCTGTTATTTGTGCCAAACTTGAGCAAGCAAAAAGAGGTTGTGCATGAAAAAGGAGATGCTGCTG
TTGTCAAAGTTGTCGAAAGTCAGATGGAGCTTTATGAAGTGAAGACAGGTAAACAACCAACTGTAAATGATTTGGTGAAA
GCTGAATATATTTCAAAAGACCAAGCTCAAACATATAATGCGGCTAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (13-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	68.539	91.753	0.629
comYC	Streptococcus suis isolate S10	60.87	94.845	0.577
comGC/cglC	Streptococcus mitis SK321	56.989	95.876	0.546
comGC/cglC	Streptococcus pneumoniae Rx1	56.522	94.845	0.536
comGC/cglC	Streptococcus pneumoniae D39	56.522	94.845	0.536
comGC/cglC	Streptococcus pneumoniae R6	56.522	94.845	0.536
comGC/cglC	Streptococcus pneumoniae TIGR4	56.522	94.845	0.536
comGC/cglC	Streptococcus mitis NCTC 12261	56.522	94.845	0.536
comYC	Streptococcus mutans UA140	56.322	89.691	0.505
comYC	Streptococcus mutans UA159	56.322	89.691	0.505
comGC	Lactococcus lactis subsp. cremoris KW2	51.685	91.753	0.474
comGC	Latilactobacillus sakei subsp. sakei 23K	45.57	81.443	0.371