Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FGL04_RS02040 | Genome accession | NZ_LR594035 |
| Coordinates | 366711..367058 (+) | Length | 115 a.a. |
| NCBI ID | WP_138068055.1 | Uniprot ID | A0A4U9XPU4 |
| Organism | Streptococcus pseudoporcinus strain NCTC5385 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 361711..372058
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL04_RS01990 (NCTC5385_00419) | - | 361974..362321 (-) | 348 | WP_138068046.1 | ImmA/IrrE family metallo-endopeptidase | - |
| FGL04_RS01995 (NCTC5385_00420) | - | 362318..362659 (-) | 342 | WP_225247753.1 | helix-turn-helix domain-containing protein | - |
| FGL04_RS02000 (NCTC5385_00421) | - | 362830..363045 (+) | 216 | WP_138068047.1 | XRE family transcriptional regulator | - |
| FGL04_RS02005 (NCTC5385_00422) | - | 363140..363397 (+) | 258 | WP_138068048.1 | hypothetical protein | - |
| FGL04_RS02010 (NCTC5385_00423) | - | 363424..363657 (+) | 234 | WP_138068049.1 | hypothetical protein | - |
| FGL04_RS02015 (NCTC5385_00425) | - | 363797..364390 (-) | 594 | WP_138068050.1 | DUF4145 domain-containing protein | - |
| FGL04_RS02020 (NCTC5385_00426) | - | 364555..365388 (+) | 834 | WP_138068051.1 | DnaD domain-containing protein | - |
| FGL04_RS02025 (NCTC5385_00427) | - | 365369..365614 (+) | 246 | WP_138068052.1 | hypothetical protein | - |
| FGL04_RS02030 (NCTC5385_00428) | - | 365598..365942 (+) | 345 | WP_138068053.1 | hypothetical protein | - |
| FGL04_RS02035 (NCTC5385_00430) | - | 366008..366688 (+) | 681 | WP_138068054.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| FGL04_RS02040 (NCTC5385_00431) | ssbA | 366711..367058 (+) | 348 | WP_138068055.1 | single-stranded DNA-binding protein | Machinery gene |
| FGL04_RS02045 (NCTC5385_00432) | - | 367015..367359 (+) | 345 | WP_225247754.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FGL04_RS02050 (NCTC5385_00433) | - | 367349..367672 (+) | 324 | WP_138068057.1 | MazG-like family protein | - |
| FGL04_RS02055 (NCTC5385_00434) | - | 367669..367908 (+) | 240 | WP_138067962.1 | hypothetical protein | - |
| FGL04_RS02060 (NCTC5385_00435) | - | 367926..368102 (+) | 177 | WP_138068058.1 | DUF1653 domain-containing protein | - |
| FGL04_RS02065 (NCTC5385_00436) | - | 368099..368404 (+) | 306 | WP_138068059.1 | hypothetical protein | - |
| FGL04_RS02070 (NCTC5385_00437) | - | 368717..369121 (+) | 405 | WP_138068060.1 | transcriptional regulator | - |
| FGL04_RS02075 (NCTC5385_00438) | - | 369237..369779 (+) | 543 | WP_138068061.1 | site-specific integrase | - |
| FGL04_RS02080 (NCTC5385_00439) | - | 370086..370424 (+) | 339 | WP_138068062.1 | HNH endonuclease | - |
| FGL04_RS02085 (NCTC5385_00440) | - | 370535..370924 (+) | 390 | WP_138068063.1 | P27 family phage terminase small subunit | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12794.23 Da Isoelectric Point: 9.4579
>NTDB_id=1127284 FGL04_RS02040 WP_138068055.1 366711..367058(+) (ssbA) [Streptococcus pseudoporcinus strain NCTC5385]
MNNVSLVGRLTRDVELKYTNSQTAVATGTLAVNRTFKSQNGEREADFINIVAWRKTAEILSNYTSKGSQIGITGRIQTRN
YEGNDGKRVYVTEVVAEQVALLDSKPENQNQNSQL
MNNVSLVGRLTRDVELKYTNSQTAVATGTLAVNRTFKSQNGEREADFINIVAWRKTAEILSNYTSKGSQIGITGRIQTRN
YEGNDGKRVYVTEVVAEQVALLDSKPENQNQNSQL
Nucleotide
Download Length: 348 bp
>NTDB_id=1127284 FGL04_RS02040 WP_138068055.1 366711..367058(+) (ssbA) [Streptococcus pseudoporcinus strain NCTC5385]
ATGAATAACGTAAGTTTAGTAGGACGATTAACAAGAGATGTAGAACTTAAATACACAAACTCACAAACAGCAGTCGCAAC
AGGAACATTAGCTGTTAACCGTACCTTTAAAAGCCAAAACGGTGAACGTGAGGCTGATTTTATTAATATTGTAGCGTGGA
GAAAAACTGCTGAAATTCTATCCAACTACACTTCTAAAGGTTCACAGATTGGAATCACTGGACGTATTCAAACACGAAAC
TACGAAGGTAATGACGGAAAACGTGTATATGTAACAGAAGTTGTAGCTGAACAAGTAGCATTACTTGATAGTAAGCCTGA
AAACCAAAATCAAAATTCTCAACTTTGA
ATGAATAACGTAAGTTTAGTAGGACGATTAACAAGAGATGTAGAACTTAAATACACAAACTCACAAACAGCAGTCGCAAC
AGGAACATTAGCTGTTAACCGTACCTTTAAAAGCCAAAACGGTGAACGTGAGGCTGATTTTATTAATATTGTAGCGTGGA
GAAAAACTGCTGAAATTCTATCCAACTACACTTCTAAAGGTTCACAGATTGGAATCACTGGACGTATTCAAACACGAAAC
TACGAAGGTAATGACGGAAAACGTGTATATGTAACAGAAGTTGTAGCTGAACAAGTAGCATTACTTGATAGTAAGCCTGA
AAACCAAAATCAAAATTCTCAACTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
61.905 |
91.304 |
0.565 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.952 |
91.304 |
0.557 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
55.046 |
94.783 |
0.522 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
50 |
92.174 |
0.461 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
50 |
92.174 |
0.461 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
50 |
92.174 |
0.461 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
49.057 |
92.174 |
0.452 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
49.057 |
92.174 |
0.452 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
49.057 |
92.174 |
0.452 |
| ssbB/cilA | Streptococcus mitis SK321 |
49.057 |
92.174 |
0.452 |
| ssbA | Streptococcus mutans UA159 |
47.115 |
90.435 |
0.426 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
45.714 |
91.304 |
0.417 |