Detailed information NTG0112154

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VV93_RS13595
• Genome accession: NZ_CP009261
• Coordinates: 2952990..2955812 (+)
• Length: 940 a.a.
• NCBI ID: WP_039554796.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 93U204
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2947990..2960812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV93_RS13575 (VV93_v1c26740)	csrD	2948154..2950151 (-)	1998	WP_181392229.1	RNase E specificity factor CsrD	-
VV93_RS13580 (VV93_v1c26750)	ssb	2950304..2950843 (-)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
VV93_RS13585 (VV93_v1c26760)	qstR	2951143..2951790 (+)	648	WP_011079388.1	response regulator transcription factor	Regulator
VV93_RS13590 (VV93_v1c26770)	galU	2951976..2952848 (+)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
VV93_RS13595 (VV93_v1c26780)	uvrA	2952990..2955812 (+)	2823	WP_039554796.1	excinuclease ABC subunit UvrA	Machinery gene
VV93_RS13600 (VV93_v1c26790)	-	2955879..2957642 (+)	1764	WP_039554798.1	PglL family O-oligosaccharyltransferase	-
VV93_RS13605 (VV93_v1c26800)	-	2957707..2958828 (-)	1122	WP_039554800.1	alanine--glyoxylate aminotransferase family protein	-
VV93_RS13610 (VV93_v1c26810)	lysC	2959343..2960692 (+)	1350	WP_039554802.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104169.73 Da
• Isoelectric Point: 6.5978

>NTDB_id=112154 VV93_RS13595 WP_039554796.1 2952990..2955812(+) (uvrA) [Vibrio vulnificus strain 93U204]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPDHKVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRGDLQQRLTESFETALELSGGIAVIAPMEGD
CEEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPERVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHAPFNSLSKRIQEVILKGSRRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCTSCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKEVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=112154 VV93_RS13595 WP_039554796.1 2952990..2955812(+) (uvrA) [Vibrio vulnificus strain 93U204]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAACATAAATCTCACCATTCCCCGAGATAAACTGAT
CGTTATTACGGGCTTATCCGGCTCAGGTAAGTCTTCTTTGGCATTTGACACTTTATACGCAGAGGGTCAGCGACGTTATG
TGGAATCCCTCTCTGCTTATGCTCGTCAATTTCTTTCATTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCCATTTCTATCGAGCAAAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACCGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGACCACAAAGTCCCTTTAGCGGCTCAAACCATTAGCC
AAATGGTCGACAAAGTGCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTGAAAGAGCGCAAAGGC
GAGCACGTTAAAACATTAGAGAATCTTGCTGCTCAAGGTTTTATCCGTGCGCGTATTGATGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTGGCGATTTAC
AACAAAGGCTCACAGAATCCTTTGAAACGGCACTGGAACTCTCAGGTGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
TGTGAAGAGATCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCAGGGGCTTGTGGCACCTGTGATGGCCTCGGGGTACAGCAATATTTTGACCCAGAACGTGTGA
TTCAAGATGCCAATTTAAGTCTTGCACAAGGGGCGATTCGGGGTTGGGATCAGAAGAACTATTACTATTTCCAAATGCTC
ACCTCGCTGGCTGAGCATTACGATTTCGATTTACATGCCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAGGTCATCTT
AAAAGGCTCAAGGCGCACTGAAATCGAATTTAAGTACATTAACGATCGAGGCGACATTCGTCTTAAACGCCATCCATTTG
AAGGTATTCTCAATACACTCGAGCGCCGTTATCGCGACACCGAATCTAACTCGGTACGAGAAGAGTTGGTGAAATATATC
TCCACCAAACCTTGCACCAGTTGTGGTGGAACACGTCTGCGCCTAGAAGCACGCAACGTGTTTATTAATGACACGACATT
GCCACAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAACTCGAAGGGCAGCGAGCTCAAA
TTGCGGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAACGTTGGCCTCAATTATTTGAACCTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTGGCTAGCCAGATCGGTGCCGGTTTGGTTGGCGT
GATGTACGTGCTCGATGAACCGTCAATAGGCCTTCACCAGCGTGACAACGAGCGCTTACTCAAAACACTCACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCAGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTGAGCGGTGCCAAGCAGATTATTGTGCCGACTCAACGCACACCAAGAGATAAGAACAAAACCGTTGAGC
TCATTGGAGCCAGTGGCAACAACCTTAAAGAGGTCAATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACTGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACCCAACTCAATGGAGCGACCACAGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGTC
GCACACCGCGTTCGAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTGGAAATGACGGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTGGGTCTTTCTTATATCCGCTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGTGTGAAACTGGCCCGAGAGTTGTCCAAACGCGATACGGGCAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTGTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• UvrA interaction domain (UvrA_inter) (130-236)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582