Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | DENG_RS09975 | Genome accession | NZ_CP004081 |
| Coordinates | 1913063..1913338 (-) | Length | 91 a.a. |
| NCBI ID | WP_002364235.1 | Uniprot ID | - |
| Organism | Enterococcus faecalis DENG1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1908063..1918338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DENG_RS09930 (DENG_02138) | - | 1908162..1908440 (+) | 279 | WP_002380425.1 | hypothetical protein | - |
| DENG_RS09940 (DENG_02139) | - | 1908618..1909091 (+) | 474 | WP_002357065.1 | universal stress protein | - |
| DENG_RS09945 (DENG_02140) | - | 1909203..1910390 (-) | 1188 | WP_002357064.1 | acetate/propionate family kinase | - |
| DENG_RS09950 (DENG_02142) | - | 1910415..1911422 (-) | 1008 | WP_002357063.1 | class I SAM-dependent methyltransferase | - |
| DENG_RS09955 (DENG_02143) | comGG | 1911551..1911904 (-) | 354 | WP_002360027.1 | competence type IV pilus minor pilin ComGG | - |
| DENG_RS09960 (DENG_02144) | comGF | 1911904..1912338 (-) | 435 | WP_002357060.1 | competence type IV pilus minor pilin ComGF | - |
| DENG_RS09965 (DENG_02145) | - | 1912328..1912654 (-) | 327 | WP_002370967.1 | type II secretion system protein | - |
| DENG_RS09970 (DENG_02146) | comGD | 1912620..1913066 (-) | 447 | WP_002366895.1 | competence type IV pilus minor pilin ComGD | - |
| DENG_RS09975 (DENG_02147) | comGC/cglC | 1913063..1913338 (-) | 276 | WP_002364235.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DENG_RS09980 (DENG_02148) | comGB | 1913338..1914384 (-) | 1047 | WP_002384344.1 | competence type IV pilus assembly protein ComGB | - |
| DENG_RS09985 (DENG_02149) | comGA | 1914341..1915309 (-) | 969 | WP_024797019.1 | competence type IV pilus ATPase ComGA | - |
| DENG_RS09990 (DENG_02150) | - | 1915550..1916878 (-) | 1329 | WP_002384343.1 | APC family permease | - |
| DENG_RS09995 (DENG_02151) | rlmN | 1917168..1918241 (-) | 1074 | WP_002384342.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10506.50 Da Isoelectric Point: 9.6586
>NTDB_id=112154 DENG_RS09975 WP_002364235.1 1913063..1913338(-) (comGC/cglC) [Enterococcus faecalis DENG1]
MKKKQKYAGFTLLEMLIVLLIISVLILLFVPNLAKHKETVDKKGNEAIVKIVESQIELYTLEKNRTPSLNELVKEGYITK
EQLDKYTAEKQ
MKKKQKYAGFTLLEMLIVLLIISVLILLFVPNLAKHKETVDKKGNEAIVKIVESQIELYTLEKNRTPSLNELVKEGYITK
EQLDKYTAEKQ
Nucleotide
Download Length: 276 bp
>NTDB_id=112154 DENG_RS09975 WP_002364235.1 1913063..1913338(-) (comGC/cglC) [Enterococcus faecalis DENG1]
ATGAAAAAGAAACAAAAATACGCAGGGTTTACATTATTAGAAATGTTGATTGTCTTATTGATCATTTCCGTATTGATTTT
ACTTTTTGTTCCTAACTTAGCGAAACATAAAGAAACAGTTGATAAAAAAGGCAATGAAGCAATCGTAAAAATTGTAGAAT
CACAAATCGAGCTCTACACACTAGAAAAAAATAGGACGCCTTCTTTAAATGAATTAGTCAAAGAAGGCTACATTACTAAA
GAGCAGTTAGATAAATATACAGCAGAAAAGCAATGA
ATGAAAAAGAAACAAAAATACGCAGGGTTTACATTATTAGAAATGTTGATTGTCTTATTGATCATTTCCGTATTGATTTT
ACTTTTTGTTCCTAACTTAGCGAAACATAAAGAAACAGTTGATAAAAAAGGCAATGAAGCAATCGTAAAAATTGTAGAAT
CACAAATCGAGCTCTACACACTAGAAAAAAATAGGACGCCTTCTTTAAATGAATTAGTCAAAGAAGGCTACATTACTAAA
GAGCAGTTAGATAAATATACAGCAGAAAAGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae Rx1 |
63.095 |
92.308 |
0.582 |
| comGC/cglC | Streptococcus pneumoniae D39 |
63.095 |
92.308 |
0.582 |
| comGC/cglC | Streptococcus pneumoniae R6 |
63.095 |
92.308 |
0.582 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
63.095 |
92.308 |
0.582 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
61.905 |
92.308 |
0.571 |
| comGC/cglC | Streptococcus mitis SK321 |
61.176 |
93.407 |
0.571 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
58.14 |
94.505 |
0.549 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
56.322 |
95.604 |
0.538 |
| comYC | Streptococcus suis isolate S10 |
52.326 |
94.505 |
0.495 |
| comYC | Streptococcus mutans UA159 |
57.692 |
85.714 |
0.495 |
| comYC | Streptococcus mutans UA140 |
57.692 |
85.714 |
0.495 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
46.154 |
100 |
0.462 |
| comGC | Staphylococcus aureus MW2 |
48.101 |
86.813 |
0.418 |
| comGC | Staphylococcus aureus N315 |
48.101 |
86.813 |
0.418 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
48.649 |
81.319 |
0.396 |