Detailed information NTG1120424

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: EL084_RS00980
• Genome accession: NZ_LR134292
• Coordinates: 187110..187586 (+)
• Length: 158 a.a.
• NCBI ID: WP_039697626.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain NCTC10389
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 182110..192586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL084_RS00980 (NCTC10389_00205)	comX/sigX	187110..187586 (+)	477	WP_039697626.1	sigma-70 family RNA polymerase sigma factor	Regulator
EL084_RS00985 (NCTC10389_00206)	-	187622..188980 (-)	1359	WP_044023457.1	aspartate kinase	-
EL084_RS00990 (NCTC10389_00207)	-	189081..189737 (+)	657	WP_003067543.1	HAD family hydrolase	-
EL084_RS00995 (NCTC10389_00208)	-	189919..190707 (+)	789	WP_126439923.1	enoyl-CoA hydratase	-
EL084_RS01000 (NCTC10389_00209)	-	190823..191257 (+)	435	WP_039695988.1	MarR family winged helix-turn-helix transcriptional regulator	-
EL084_RS01005 (NCTC10389_00210)	-	191260..192234 (+)	975	WP_126439924.1	beta-ketoacyl-ACP synthase III	-
EL084_RS01010 (NCTC10389_00211)	-	192293..192517 (+)	225	WP_003067534.1	acyl carrier protein	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 19314.13 Da
• Isoelectric Point: 8.7333

>NTDB_id=1120424 EL084_RS00980 WP_039697626.1 187110..187586(+) (comX/sigX) [Streptococcus equinus strain NCTC10389]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPDVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFFEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide

• Length: 477 bp

>NTDB_id=1120424 EL084_RS00980 WP_039697626.1 187110..187586(+) (comX/sigX) [Streptococcus equinus strain NCTC10389]
GTGGATTTTGAAAGTTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCATTACTTTGTGAAATTATGGGA
TTATGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGATGTTCTCATTAATGAGG
GAAGACGCTATACTTACTTTAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAGATTAGTCATTGTGTCCCTCAGCTTAATTTTTTTGAAGTGGCAGA
CTTTATTGCTTACCGAGATAGTTTGTCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAAGTAG
TCAGAGGGGAACGATTTGAAGGGAAGAAAGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	78.344	99.367	0.778
comX/sigX	Streptococcus mutans UA159	47.436	98.734	0.468
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	46.795	98.734	0.462
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	46.795	98.734	0.462
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	46.795	98.734	0.462
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	46.795	98.734	0.462
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	46.795	98.734	0.462
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	46.795	98.734	0.462
comX	Streptococcus sobrinus strain NIDR 6715-7	43.506	97.468	0.424
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	39.744	98.734	0.392
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	39.744	98.734	0.392
comX/sigX	Streptococcus suis isolate S10	38.217	99.367	0.38
comX/sigX	Streptococcus suis P1/7	38.217	99.367	0.38
comX/sigX	Streptococcus suis D9	38.217	99.367	0.38
comX	Streptococcus thermophilus LMG 18311	38.312	97.468	0.373
comX	Streptococcus thermophilus LMD-9	38.312	97.468	0.373