Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | EL079_RS08965 | Genome accession | NZ_LR134283 |
| Coordinates | 1799650..1800045 (+) | Length | 131 a.a. |
| NCBI ID | WP_003028522.1 | Uniprot ID | A0AAI9NIC2 |
| Organism | Streptococcus anginosus strain NCTC10713 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1794650..1805045
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL079_RS08935 (NCTC10713_01827) | - | 1795036..1796340 (+) | 1305 | WP_003030856.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| EL079_RS08940 (NCTC10713_01829) | - | 1796518..1797078 (+) | 561 | WP_018543594.1 | folate family ECF transporter S component | - |
| EL079_RS08945 (NCTC10713_01830) | pepA | 1797141..1798205 (-) | 1065 | WP_003030888.1 | glutamyl aminopeptidase | - |
| EL079_RS08950 (NCTC10713_01831) | - | 1798325..1798612 (+) | 288 | WP_003030900.1 | DUF4651 domain-containing protein | - |
| EL079_RS08955 (NCTC10713_01832) | - | 1798609..1798926 (+) | 318 | WP_003030917.1 | thioredoxin family protein | - |
| EL079_RS08960 (NCTC10713_01833) | ytpR | 1798943..1799569 (+) | 627 | WP_003030886.1 | YtpR family tRNA-binding protein | - |
| EL079_RS08965 (NCTC10713_01834) | ssbB/cilA | 1799650..1800045 (+) | 396 | WP_003028522.1 | single-stranded DNA-binding protein | Machinery gene |
| EL079_RS08970 (NCTC10713_01835) | - | 1800338..1801324 (+) | 987 | WP_003030919.1 | sugar ABC transporter substrate-binding protein | - |
| EL079_RS08975 (NCTC10713_01836) | - | 1801324..1802637 (+) | 1314 | WP_003030861.1 | sensor histidine kinase | - |
| EL079_RS08980 (NCTC10713_01837) | - | 1802630..1803313 (+) | 684 | WP_003030916.1 | response regulator transcription factor | - |
| EL079_RS08985 (NCTC10713_01838) | - | 1803310..1804596 (+) | 1287 | WP_026248189.1 | ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14671.59 Da Isoelectric Point: 5.9381
>NTDB_id=1120063 EL079_RS08965 WP_003028522.1 1799650..1800045(+) (ssbB/cilA) [Streptococcus anginosus strain NCTC10713]
MYNKVILIGRLVNTPELNKTANDKSVARATLAVNRRYKGQNGEREADFVNVVVWGKLAETLASYASKGSLISLDGELRTR
RYEKDGVTHYVTEVLCNGFQLLESRAQRALRENNAGADLADLLLEEEELPF
MYNKVILIGRLVNTPELNKTANDKSVARATLAVNRRYKGQNGEREADFVNVVVWGKLAETLASYASKGSLISLDGELRTR
RYEKDGVTHYVTEVLCNGFQLLESRAQRALRENNAGADLADLLLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1120063 EL079_RS08965 WP_003028522.1 1799650..1800045(+) (ssbB/cilA) [Streptococcus anginosus strain NCTC10713]
ATGTATAATAAAGTAATTTTAATCGGTCGCTTGGTGAATACACCAGAGTTAAACAAAACAGCTAATGATAAATCTGTGGC
GCGTGCAACACTTGCGGTCAATCGTCGCTACAAAGGACAAAATGGTGAACGAGAAGCAGACTTCGTCAATGTCGTTGTTT
GGGGCAAGTTAGCCGAAACATTGGCAAGTTATGCAAGTAAAGGCAGCTTGATTTCACTAGACGGCGAACTTCGCACTCGC
CGTTATGAGAAAGACGGAGTGACGCATTATGTCACAGAAGTGCTTTGCAATGGTTTCCAGCTATTAGAAAGCCGTGCACA
GCGAGCTCTTCGTGAGAATAATGCAGGTGCAGACTTGGCAGATTTGCTTCTGGAAGAAGAGGAATTGCCATTTTAA
ATGTATAATAAAGTAATTTTAATCGGTCGCTTGGTGAATACACCAGAGTTAAACAAAACAGCTAATGATAAATCTGTGGC
GCGTGCAACACTTGCGGTCAATCGTCGCTACAAAGGACAAAATGGTGAACGAGAAGCAGACTTCGTCAATGTCGTTGTTT
GGGGCAAGTTAGCCGAAACATTGGCAAGTTATGCAAGTAAAGGCAGCTTGATTTCACTAGACGGCGAACTTCGCACTCGC
CGTTATGAGAAAGACGGAGTGACGCATTATGTCACAGAAGTGCTTTGCAATGGTTTCCAGCTATTAGAAAGCCGTGCACA
GCGAGCTCTTCGTGAGAATAATGCAGGTGCAGACTTGGCAGATTTGCTTCTGGAAGAAGAGGAATTGCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
83.206 |
100 |
0.832 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
83.206 |
100 |
0.832 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
83.206 |
100 |
0.832 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
83.206 |
100 |
0.832 |
| ssbB/cilA | Streptococcus mitis SK321 |
83.206 |
100 |
0.832 |
| ssbA | Streptococcus mutans UA159 |
80.153 |
100 |
0.802 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
75.573 |
100 |
0.756 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
61.607 |
85.496 |
0.527 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50 |
80.916 |
0.405 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.018 |
86.26 |
0.397 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
45.37 |
82.443 |
0.374 |