Detailed information NTG1106752

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ACN6MU_RS07880
• Genome accession: NZ_CP183885
• Coordinates: 1552980..1553375 (-)
• Length: 131 a.a.
• NCBI ID: WP_419958631.1
• Uniprot ID: -
• Organism: Psychrobacillus psychrotolerans strain BC2
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1547980..1558375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN6MU_RS07855 (ACN6MU_07855)	-	1548390..1548623 (-)	234	WP_340762758.1	DUF3953 domain-containing protein	-
ACN6MU_RS07860 (ACN6MU_07860)	holA	1548676..1549680 (-)	1005	WP_093538482.1	DNA polymerase III subunit delta	-
ACN6MU_RS07865 (ACN6MU_07865)	-	1549836..1549970 (+)	135	WP_090563866.1	YqzM family protein	-
ACN6MU_RS07870 (ACN6MU_07870)	-	1550065..1552155 (-)	2091	WP_419958630.1	DNA internalization-related competence protein ComEC/Rec2	-
ACN6MU_RS07875 (ACN6MU_07875)	-	1552329..1552910 (-)	582	WP_093538481.1	ComE operon protein 2	-
ACN6MU_RS07880 (ACN6MU_07880)	comEA	1552980..1553375 (-)	396	WP_419958631.1	helix-hairpin-helix domain-containing protein	Machinery gene
ACN6MU_RS07885 (ACN6MU_07885)	-	1554189..1554923 (-)	735	WP_419958632.1	class I SAM-dependent DNA methyltransferase	-
ACN6MU_RS07890 (ACN6MU_07890)	rsfS	1554923..1555276 (-)	354	WP_093537072.1	ribosome silencing factor	-
ACN6MU_RS07895 (ACN6MU_07895)	yqeK	1555273..1555848 (-)	576	WP_340762761.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ACN6MU_RS07900 (ACN6MU_07900)	-	1555838..1556410 (-)	573	WP_340762762.1	nicotinate-nucleotide adenylyltransferase	-
ACN6MU_RS07905 (ACN6MU_07905)	yhbY	1556407..1556712 (-)	306	WP_093537069.1	ribosome assembly RNA-binding protein YhbY	-
ACN6MU_RS07910 (ACN6MU_07910)	aroE	1556699..1557529 (-)	831	WP_419958633.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14166.06 Da
• Isoelectric Point: 5.0058

>NTDB_id=1106752 ACN6MU_RS07880 WP_419958631.1 1552980..1553375(-) (comEA) [Psychrobacillus psychrotolerans strain BC2]
MKPGVYELSEGDRVLKAIEMAGGYIESSNSKHINHAERVKDEMVIYIPKEGEEVEESPLATNGSSQSSLVNINNADATVL
TTLPGIGVAKAEAIIAHREQSGAFKEKQDLTKVTGIGQKTFEKLEPLITVK

Nucleotide

• Length: 396 bp

>NTDB_id=1106752 ACN6MU_RS07880 WP_419958631.1 1552980..1553375(-) (comEA) [Psychrobacillus psychrotolerans strain BC2]
ATGAAGCCAGGAGTCTATGAGCTTTCTGAAGGAGACCGTGTGTTAAAGGCGATTGAAATGGCTGGAGGTTACATAGAGTC
TAGTAATTCCAAACATATCAATCATGCAGAGCGTGTAAAAGATGAAATGGTTATTTATATTCCAAAAGAAGGCGAAGAAG
TAGAAGAATCACCTTTAGCTACTAACGGCAGTTCACAGTCATCATTAGTGAACATAAATAATGCAGATGCCACAGTTCTG
ACTACTTTACCTGGTATTGGCGTTGCTAAGGCGGAGGCTATTATTGCTCATCGGGAGCAGTCTGGAGCCTTCAAGGAAAA
ACAAGATTTGACGAAAGTGACAGGTATTGGACAAAAGACATTTGAGAAACTCGAACCATTAATAACGGTAAAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (67-129)

• SLBB domain (SLBB) (2-47)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	50	100	0.511
comEA	Lactococcus lactis subsp. cremoris KW2	43.478	100	0.458
comEA	Latilactobacillus sakei subsp. sakei 23K	37.908	100	0.443
comEA/celA/cilE	Streptococcus pneumoniae Rx1	43.511	100	0.435
comEA/celA/cilE	Streptococcus pneumoniae D39	43.511	100	0.435
comEA/celA/cilE	Streptococcus pneumoniae R6	43.511	100	0.435
comEA/celA/cilE	Streptococcus mitis SK321	41.985	100	0.42
comEA/celA/cilE	Streptococcus mitis NCTC 12261	41.985	100	0.42
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	41.985	100	0.42
comEA	Streptococcus thermophilus LMD-9	38.298	100	0.412
comEA	Staphylococcus aureus MW2	37.313	100	0.382
comEA	Staphylococcus aureus N315	36.567	100	0.374