Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | ACK2OW_RS09215 | Genome accession | NZ_CP180575 |
| Coordinates | 1716368..1716709 (-) | Length | 113 a.a. |
| NCBI ID | WP_416042649.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain K3C | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1711368..1721709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2OW_RS09200 (ACK2OW_09200) | hepAB | 1711608..1714376 (+) | 2769 | WP_326131684.1 | DEAD/DEAH box helicase | - |
| ACK2OW_RS09205 (ACK2OW_09205) | ywpJ | 1714504..1715361 (-) | 858 | WP_038829853.1 | phosphatase YwpJ | - |
| ACK2OW_RS09210 (ACK2OW_09210) | glcR | 1715367..1716143 (-) | 777 | WP_326224414.1 | transcriptional regulator GlcR | - |
| ACK2OW_RS09215 (ACK2OW_09215) | ssbB | 1716368..1716709 (-) | 342 | WP_416042649.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| ACK2OW_RS09220 (ACK2OW_09220) | ywpG | 1716786..1717169 (-) | 384 | WP_003227796.1 | DynA interaction protein YwpG | - |
| ACK2OW_RS09225 (ACK2OW_09225) | ywpF | 1717344..1717754 (+) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| ACK2OW_RS09230 (ACK2OW_09230) | - | 1717895..1718533 (-) | 639 | WP_201755717.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12443.06 Da Isoelectric Point: 7.1318
>NTDB_id=1096774 ACK2OW_RS09215 WP_416042649.1 1716368..1716709(-) (ssbB) [Bacillus subtilis strain K3C]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVHFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVHFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=1096774 ACK2OW_RS09215 WP_416042649.1 1716368..1716709(-) (ssbB) [Bacillus subtilis strain K3C]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCATTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCATTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
98.23 |
100 |
0.982 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
46.226 |
93.805 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |