Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | ACMX8W_RS19725 | Genome accession | NZ_CP180439 |
| Coordinates | 3774114..3774455 (-) | Length | 113 a.a. |
| NCBI ID | WP_015384858.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain Z-294 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3769114..3779455
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMX8W_RS19710 (ACMX8W_19710) | hepAB | 3769356..3772124 (+) | 2769 | WP_047183317.1 | DEAD/DEAH box helicase | - |
| ACMX8W_RS19715 (ACMX8W_19715) | ywpJ | 3772250..3773107 (-) | 858 | WP_015384856.1 | phosphatase YwpJ | - |
| ACMX8W_RS19720 (ACMX8W_19720) | glcR | 3773113..3773889 (-) | 777 | WP_003244075.1 | transcriptional regulator GlcR | - |
| ACMX8W_RS19725 (ACMX8W_19725) | ssbB | 3774114..3774455 (-) | 342 | WP_015384858.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| ACMX8W_RS19730 (ACMX8W_19730) | ywpG | 3774532..3774915 (-) | 384 | WP_003227796.1 | DynA interaction protein YwpG | - |
| ACMX8W_RS19735 (ACMX8W_19735) | ywpF | 3775090..3775500 (+) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| ACMX8W_RS19740 (ACMX8W_19740) | - | 3775625..3776263 (-) | 639 | WP_047183318.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12476.14 Da Isoelectric Point: 7.8150
>NTDB_id=1095909 ACMX8W_RS19725 WP_015384858.1 3774114..3774455(-) (ssbB) [Bacillus subtilis strain Z-294]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLIGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLIGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=1095909 ACMX8W_RS19725 WP_015384858.1 3774114..3774455(-) (ssbB) [Bacillus subtilis strain Z-294]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCATCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCATCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
98.23 |
100 |
0.982 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.491 |
93.805 |
0.549 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
45.37 |
95.575 |
0.434 |
| ssbA | Streptococcus mutans UA159 |
45.283 |
93.805 |
0.425 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.444 |
95.575 |
0.425 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
42.857 |
92.92 |
0.398 |